Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
TOP2AP11388 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TOP2AP11388 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TOP2AP11388 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC27.31■■□□□ 1.96
TOP2AP11388 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TOP2AP11388 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TOP2AP11388 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TOP2AP11388 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
TOP2AP11388 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
TOP2AP11388 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
TOP2AP11388 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
TOP2AP11388 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
TOP2AP11388 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC27.31■■□□□ 1.96
TOP2AP11388 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC27.31■■□□□ 1.96
TOP2AP11388 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC27.31■■□□□ 1.96
TOP2AP11388 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC27.31■■□□□ 1.96
TOP2AP11388 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC27.31■■□□□ 1.96
TOP2AP11388 NKG7-204ENST00000595217 816 ntTSL 2 BASIC27.31■■□□□ 1.96
TOP2AP11388 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TOP2AP11388 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
TOP2AP11388 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC27.3■■□□□ 1.96
TOP2AP11388 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TOP2AP11388 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC27.3■■□□□ 1.96
TOP2AP11388 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TOP2AP11388 AC022211.2-201ENST00000585075 2527 ntBASIC27.3■■□□□ 1.96
TOP2AP11388 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TOP2AP11388 SP100-205ENST00000409824 1802 ntTSL 5 BASIC27.3■■□□□ 1.96
TOP2AP11388 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TOP2AP11388 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
TOP2AP11388 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TOP2AP11388 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TOP2AP11388 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC27.3■■□□□ 1.96
TOP2AP11388 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
TOP2AP11388 PTPA-218ENST00000435132 618 ntTSL 2 BASIC27.3■■□□□ 1.96
TOP2AP11388 AC114812.1-204ENST00000449669 728 ntBASIC27.3■■□□□ 1.96
TOP2AP11388 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC27.3■■□□□ 1.96
TOP2AP11388 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC27.3■■□□□ 1.96
TOP2AP11388 RN7SL190P-201ENST00000582519 257 ntBASIC27.3■■□□□ 1.96
TOP2AP11388 PPY2P-201ENST00000582808 702 ntBASIC27.3■■□□□ 1.96
TOP2AP11388 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TOP2AP11388 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
TOP2AP11388 NDUFV2P1-201ENST00000596415 907 ntBASIC27.3■■□□□ 1.96
TOP2AP11388 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC27.3■■□□□ 1.96
TOP2AP11388 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TOP2AP11388 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TOP2AP11388 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TOP2AP11388 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TOP2AP11388 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
TOP2AP11388 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
TOP2AP11388 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TOP2AP11388 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TOP2AP11388 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TOP2AP11388 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC27.29■■□□□ 1.96
TOP2AP11388 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC27.29■■□□□ 1.96
TOP2AP11388 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TOP2AP11388 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC27.29■■□□□ 1.96
TOP2AP11388 RGS5-214ENST00000429865 754 ntTSL 3 BASIC27.29■■□□□ 1.96
TOP2AP11388 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC27.29■■□□□ 1.96
TOP2AP11388 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
TOP2AP11388 EIF4HP1-201ENST00000453115 687 ntBASIC27.29■■□□□ 1.96
TOP2AP11388 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC27.29■■□□□ 1.96
TOP2AP11388 AC044849.1-201ENST00000519737 1188 ntBASIC27.29■■□□□ 1.96
TOP2AP11388 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC27.29■■□□□ 1.96
TOP2AP11388 AL645728.2-202ENST00000641679 227 ntBASIC27.29■■□□□ 1.96
TOP2AP11388 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TOP2AP11388 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TOP2AP11388 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TOP2AP11388 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC27.28■■□□□ 1.96
TOP2AP11388 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC27.28■■□□□ 1.96
TOP2AP11388 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TOP2AP11388 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TOP2AP11388 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TOP2AP11388 AL354877.1-201ENST00000424412 413 ntBASIC27.28■■□□□ 1.96
TOP2AP11388 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC27.28■■□□□ 1.96
TOP2AP11388 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC27.28■■□□□ 1.96
TOP2AP11388 RETN-203ENST00000629642 400 ntTSL 5 BASIC27.28■■□□□ 1.96
TOP2AP11388 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TOP2AP11388 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TOP2AP11388 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
TOP2AP11388 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TOP2AP11388 AC080080.1-201ENST00000625121 2420 ntBASIC27.28■■□□□ 1.96
TOP2AP11388 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TOP2AP11388 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TOP2AP11388 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC27.27■■□□□ 1.96
TOP2AP11388 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TOP2AP11388 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TOP2AP11388 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC27.27■■□□□ 1.96
TOP2AP11388 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC27.27■■□□□ 1.96
TOP2AP11388 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC27.27■■□□□ 1.96
TOP2AP11388 SERPINA13P-202ENST00000478994 924 ntBASIC27.27■■□□□ 1.96
TOP2AP11388 AC126915.1-201ENST00000522847 1038 ntBASIC27.27■■□□□ 1.96
TOP2AP11388 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
TOP2AP11388 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC27.27■■□□□ 1.96
TOP2AP11388 AC016629.1-201ENST00000596579 586 ntBASIC27.27■■□□□ 1.96
TOP2AP11388 AC138649.2-201ENST00000615886 705 ntBASIC27.27■■□□□ 1.96
TOP2AP11388 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TOP2AP11388 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TOP2AP11388 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC27.27■■□□□ 1.96
TOP2AP11388 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC27.27■■□□□ 1.96
TOP2AP11388 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms