Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CD28P10747 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CD28P10747 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CD28P10747 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CD28P10747 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CD28P10747 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CD28P10747 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
CD28P10747 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.52□□□□□ -0.4
CD28P10747 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
CD28P10747 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD28P10747 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CD28P10747 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.52□□□□□ -0.41
CD28P10747 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.52□□□□□ -0.41
CD28P10747 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.52□□□□□ -0.41
CD28P10747 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD28P10747 GIMAP3P-201ENST00000495150 836 ntBASIC12.52□□□□□ -0.41
CD28P10747 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.52□□□□□ -0.41
CD28P10747 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.52□□□□□ -0.41
CD28P10747 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.52□□□□□ -0.41
CD28P10747 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.52□□□□□ -0.41
CD28P10747 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.52□□□□□ -0.41
CD28P10747 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.52□□□□□ -0.41
CD28P10747 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
CD28P10747 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.52□□□□□ -0.41
CD28P10747 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.52□□□□□ -0.41
CD28P10747 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CD28P10747 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
CD28P10747 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
CD28P10747 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD28P10747 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD28P10747 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CD28P10747 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CD28P10747 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CD28P10747 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD28P10747 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC12.52□□□□□ -0.41
CD28P10747 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC12.52□□□□□ -0.41
CD28P10747 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CD28P10747 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
CD28P10747 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CD28P10747 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.52□□□□□ -0.41
CD28P10747 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CD28P10747 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CD28P10747 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
CD28P10747 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD28P10747 CYP4F24P-201ENST00000586049 1580 ntBASIC12.52□□□□□ -0.41
CD28P10747 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CD28P10747 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.51□□□□□ -0.41
CD28P10747 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CD28P10747 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CD28P10747 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CD28P10747 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
CD28P10747 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.51□□□□□ -0.41
CD28P10747 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
CD28P10747 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.51□□□□□ -0.41
CD28P10747 MYCLP2-201ENST00000449268 967 ntBASIC12.51□□□□□ -0.41
CD28P10747 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.51□□□□□ -0.41
CD28P10747 AC011495.1-201ENST00000498085 584 ntBASIC12.51□□□□□ -0.41
CD28P10747 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.51□□□□□ -0.41
CD28P10747 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.51□□□□□ -0.41
CD28P10747 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.51□□□□□ -0.41
CD28P10747 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.51□□□□□ -0.41
CD28P10747 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
CD28P10747 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.51□□□□□ -0.41
CD28P10747 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.51□□□□□ -0.41
CD28P10747 AC132938.2-201ENST00000579188 680 ntBASIC12.51□□□□□ -0.41
CD28P10747 IGHV3-72-202ENST00000621503 303 ntBASIC12.51□□□□□ -0.41
CD28P10747 AL591163.1-201ENST00000641757 987 ntBASIC12.51□□□□□ -0.41
CD28P10747 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.51□□□□□ -0.41
CD28P10747 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD28P10747 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
CD28P10747 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.5□□□□□ -0.41
CD28P10747 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD28P10747 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms