Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.58■□□□□ 0.24
CD48P09326 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD48P09326 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD48P09326 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD48P09326 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.58■□□□□ 0.24
CD48P09326 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.58■□□□□ 0.24
CD48P09326 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD48P09326 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD48P09326 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CD48P09326 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD48P09326 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD48P09326 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.57■□□□□ 0.24
CD48P09326 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.57■□□□□ 0.24
CD48P09326 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 KRT8P37-201ENST00000451609 1420 ntBASIC16.57■□□□□ 0.24
CD48P09326 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.57■□□□□ 0.24
CD48P09326 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.57■□□□□ 0.24
CD48P09326 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.57■□□□□ 0.24
CD48P09326 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CD48P09326 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CD48P09326 AC026150.2-201ENST00000564693 1156 ntBASIC16.57■□□□□ 0.24
CD48P09326 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 AC018529.1-201ENST00000613063 361 ntBASIC16.57■□□□□ 0.24
CD48P09326 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.57■□□□□ 0.24
CD48P09326 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD48P09326 AC105250.1-201ENST00000509378 2057 ntBASIC16.57■□□□□ 0.24
CD48P09326 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.57■□□□□ 0.24
CD48P09326 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
CD48P09326 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD48P09326 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD48P09326 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.56■□□□□ 0.24
CD48P09326 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD48P09326 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD48P09326 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.56■□□□□ 0.24
CD48P09326 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD48P09326 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CD48P09326 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD48P09326 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD48P09326 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.56■□□□□ 0.24
CD48P09326 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.56■□□□□ 0.24
CD48P09326 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD48P09326 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.56■□□□□ 0.24
CD48P09326 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD48P09326 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD48P09326 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.56■□□□□ 0.24
CD48P09326 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.56■□□□□ 0.24
CD48P09326 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.56■□□□□ 0.24
CD48P09326 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.56■□□□□ 0.24
CD48P09326 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.56■□□□□ 0.24
CD48P09326 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.56■□□□□ 0.24
CD48P09326 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.56■□□□□ 0.24
CD48P09326 AC105021.1-202ENST00000570572 669 ntBASIC16.56■□□□□ 0.24
CD48P09326 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD48P09326 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.56■□□□□ 0.24
CD48P09326 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.56■□□□□ 0.24
CD48P09326 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.56■□□□□ 0.24
CD48P09326 AC009093.7-201ENST00000623853 1223 ntBASIC16.56■□□□□ 0.24
CD48P09326 AC134684.3-201ENST00000641758 218 ntBASIC16.56■□□□□ 0.24
CD48P09326 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD48P09326 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.56■□□□□ 0.24
CD48P09326 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CD48P09326 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CD48P09326 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD48P09326 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD48P09326 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.56■□□□□ 0.24
CD48P09326 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CD48P09326 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD48P09326 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CD48P09326 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.56■□□□□ 0.24
CD48P09326 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.55■□□□□ 0.24
CD48P09326 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CD48P09326 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD48P09326 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD48P09326 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms