Protein–RNA interactions for Protein: P05106

ITGB3, Integrin beta-3, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB3P05106 HNRNPUP1-201ENST00000554987 333 ntBASIC17.13■□□□□ 0.33
ITGB3P05106 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.13■□□□□ 0.33
ITGB3P05106 AC104794.3-201ENST00000566840 1248 ntBASIC17.13■□□□□ 0.33
ITGB3P05106 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
ITGB3P05106 MIR3197-201ENST00000582241 73 ntBASIC17.13■□□□□ 0.33
ITGB3P05106 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB3P05106 AC074044.1-201ENST00000609673 707 ntBASIC17.13■□□□□ 0.33
ITGB3P05106 AC008761.3-201ENST00000624803 892 ntBASIC17.13■□□□□ 0.33
ITGB3P05106 AC004461.2-201ENST00000629517 803 ntBASIC17.13■□□□□ 0.33
ITGB3P05106 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB3P05106 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB3P05106 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB3P05106 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.13■□□□□ 0.33
ITGB3P05106 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB3P05106 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB3P05106 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB3P05106 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB3P05106 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB3P05106 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ITGB3P05106 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGB3P05106 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ITGB3P05106 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.12■□□□□ 0.33
ITGB3P05106 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ITGB3P05106 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.12■□□□□ 0.33
ITGB3P05106 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.12■□□□□ 0.33
ITGB3P05106 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.12■□□□□ 0.33
ITGB3P05106 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ITGB3P05106 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 AC114501.2-201ENST00000439631 535 ntBASIC17.12■□□□□ 0.33
ITGB3P05106 TARDBPP1-201ENST00000442013 1203 ntBASIC17.12■□□□□ 0.33
ITGB3P05106 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.12■□□□□ 0.33
ITGB3P05106 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.12■□□□□ 0.33
ITGB3P05106 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.12■□□□□ 0.33
ITGB3P05106 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.12■□□□□ 0.33
ITGB3P05106 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.12■□□□□ 0.33
ITGB3P05106 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.12■□□□□ 0.33
ITGB3P05106 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.12■□□□□ 0.33
ITGB3P05106 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.12■□□□□ 0.33
ITGB3P05106 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.12■□□□□ 0.33
ITGB3P05106 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.12■□□□□ 0.33
ITGB3P05106 AC009118.2-201ENST00000613275 655 ntBASIC17.12■□□□□ 0.33
ITGB3P05106 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.12■□□□□ 0.33
ITGB3P05106 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.12■□□□□ 0.33
ITGB3P05106 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.12■□□□□ 0.33
ITGB3P05106 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.12■□□□□ 0.33
ITGB3P05106 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
ITGB3P05106 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
ITGB3P05106 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
ITGB3P05106 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
ITGB3P05106 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.12■□□□□ 0.33
ITGB3P05106 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGB3P05106 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGB3P05106 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITGB3P05106 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGB3P05106 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITGB3P05106 Z97205.2-201ENST00000564697 1639 ntBASIC17.11■□□□□ 0.33
ITGB3P05106 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.11■□□□□ 0.33
ITGB3P05106 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGB3P05106 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.11■□□□□ 0.33
ITGB3P05106 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITGB3P05106 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ITGB3P05106 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGB3P05106 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGB3P05106 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGB3P05106 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGB3P05106 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGB3P05106 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITGB3P05106 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGB3P05106 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.11■□□□□ 0.33
ITGB3P05106 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.11■□□□□ 0.33
ITGB3P05106 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.11■□□□□ 0.33
ITGB3P05106 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.11■□□□□ 0.33
ITGB3P05106 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ITGB3P05106 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.11■□□□□ 0.33
ITGB3P05106 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms