Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PMPCBO75439 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.28■□□□□ 0.2
PMPCBO75439 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PMPCBO75439 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.28■□□□□ 0.2
PMPCBO75439 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.28■□□□□ 0.2
PMPCBO75439 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.28■□□□□ 0.2
PMPCBO75439 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PMPCBO75439 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PMPCBO75439 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PMPCBO75439 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PMPCBO75439 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.28■□□□□ 0.2
PMPCBO75439 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PMPCBO75439 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PMPCBO75439 AC046158.3-201ENST00000624947 2558 ntBASIC16.28■□□□□ 0.2
PMPCBO75439 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PMPCBO75439 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PMPCBO75439 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PMPCBO75439 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMPCBO75439 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMPCBO75439 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMPCBO75439 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMPCBO75439 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
PMPCBO75439 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.27■□□□□ 0.2
PMPCBO75439 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PMPCBO75439 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMPCBO75439 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PMPCBO75439 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMPCBO75439 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMPCBO75439 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.27■□□□□ 0.2
PMPCBO75439 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.27■□□□□ 0.2
PMPCBO75439 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PMPCBO75439 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMPCBO75439 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMPCBO75439 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.27■□□□□ 0.2
PMPCBO75439 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.27■□□□□ 0.2
PMPCBO75439 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.27■□□□□ 0.2
PMPCBO75439 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.27■□□□□ 0.2
PMPCBO75439 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.27■□□□□ 0.2
PMPCBO75439 AC026979.3-201ENST00000607315 403 ntBASIC16.27■□□□□ 0.2
PMPCBO75439 MIR6080-201ENST00000617359 66 ntBASIC16.27■□□□□ 0.2
PMPCBO75439 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.27■□□□□ 0.2
PMPCBO75439 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.27■□□□□ 0.2
PMPCBO75439 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.27■□□□□ 0.2
PMPCBO75439 AC079781.4-201ENST00000641908 219 ntBASIC16.27■□□□□ 0.2
PMPCBO75439 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.27■□□□□ 0.2
PMPCBO75439 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PMPCBO75439 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMPCBO75439 AC105917.1-201ENST00000506637 2539 ntBASIC16.27■□□□□ 0.2
PMPCBO75439 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PMPCBO75439 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PMPCBO75439 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PMPCBO75439 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PMPCBO75439 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PMPCBO75439 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PMPCBO75439 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PMPCBO75439 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PMPCBO75439 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PMPCBO75439 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.27■□□□□ 0.19
PMPCBO75439 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
PMPCBO75439 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PMPCBO75439 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.27■□□□□ 0.19
PMPCBO75439 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
PMPCBO75439 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMPCBO75439 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMPCBO75439 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.26■□□□□ 0.19
PMPCBO75439 AC018892.3-201ENST00000623986 2499 ntBASIC16.26■□□□□ 0.19
PMPCBO75439 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMPCBO75439 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PMPCBO75439 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PMPCBO75439 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
PMPCBO75439 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMPCBO75439 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMPCBO75439 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PMPCBO75439 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.26■□□□□ 0.19
PMPCBO75439 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.26■□□□□ 0.19
PMPCBO75439 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMPCBO75439 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.26■□□□□ 0.19
PMPCBO75439 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMPCBO75439 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.26■□□□□ 0.19
PMPCBO75439 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PMPCBO75439 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.26■□□□□ 0.19
PMPCBO75439 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.26■□□□□ 0.19
PMPCBO75439 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMPCBO75439 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.26■□□□□ 0.19
PMPCBO75439 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
PMPCBO75439 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PMPCBO75439 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.26■□□□□ 0.19
PMPCBO75439 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMPCBO75439 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.26■□□□□ 0.19
PMPCBO75439 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMPCBO75439 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMPCBO75439 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.26■□□□□ 0.19
PMPCBO75439 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.26■□□□□ 0.19
PMPCBO75439 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.26■□□□□ 0.19
PMPCBO75439 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PMPCBO75439 CYP4F24P-201ENST00000586049 1580 ntBASIC16.26■□□□□ 0.19
PMPCBO75439 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.25■□□□□ 0.19
PMPCBO75439 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMPCBO75439 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMPCBO75439 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms