Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
SBNO1A3KN83 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC21.34■■□□□ 1.01
SBNO1A3KN83 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SBNO1A3KN83 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SBNO1A3KN83 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC21.34■■□□□ 1.01
SBNO1A3KN83 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC21.34■■□□□ 1.01
SBNO1A3KN83 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
SBNO1A3KN83 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC21.34■■□□□ 1.01
SBNO1A3KN83 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC21.34■■□□□ 1.01
SBNO1A3KN83 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SBNO1A3KN83 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SBNO1A3KN83 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SBNO1A3KN83 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SBNO1A3KN83 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC21.34■■□□□ 1.01
SBNO1A3KN83 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC21.34■■□□□ 1.01
SBNO1A3KN83 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC21.34■■□□□ 1.01
SBNO1A3KN83 CHMP4BP1-201ENST00000556017 588 ntBASIC21.34■■□□□ 1.01
SBNO1A3KN83 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
SBNO1A3KN83 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SBNO1A3KN83 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC21.34■■□□□ 1.01
SBNO1A3KN83 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SBNO1A3KN83 AC134407.2-201ENST00000625089 1978 ntBASIC21.33■■□□□ 1.01
SBNO1A3KN83 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.33■■□□□ 1.01
SBNO1A3KN83 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SBNO1A3KN83 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SBNO1A3KN83 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SBNO1A3KN83 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SBNO1A3KN83 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SBNO1A3KN83 AGGF1P2-201ENST00000426656 2106 ntBASIC21.33■■□□□ 1.01
SBNO1A3KN83 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SBNO1A3KN83 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SBNO1A3KN83 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC21.33■■□□□ 1
SBNO1A3KN83 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SBNO1A3KN83 HNRNPA1P32-201ENST00000396326 963 ntBASIC21.33■■□□□ 1
SBNO1A3KN83 MIR1202-201ENST00000408529 83 ntBASIC21.33■■□□□ 1
SBNO1A3KN83 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC21.33■■□□□ 1
SBNO1A3KN83 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC21.33■■□□□ 1
SBNO1A3KN83 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC21.33■■□□□ 1
SBNO1A3KN83 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC21.33■■□□□ 1
SBNO1A3KN83 RERG-205ENST00000537647 935 ntTSL 2 BASIC21.33■■□□□ 1
SBNO1A3KN83 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC21.33■■□□□ 1
SBNO1A3KN83 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC21.33■■□□□ 1
SBNO1A3KN83 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC21.33■■□□□ 1
SBNO1A3KN83 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC21.33■■□□□ 1
SBNO1A3KN83 KRT8P35-201ENST00000483942 1338 ntBASIC21.33■■□□□ 1
SBNO1A3KN83 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SBNO1A3KN83 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC21.32■■□□□ 1
SBNO1A3KN83 OS9-205ENST00000413095 1660 ntTSL 2 BASIC21.32■■□□□ 1
SBNO1A3KN83 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC21.32■■□□□ 1
SBNO1A3KN83 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC21.32■■□□□ 1
SBNO1A3KN83 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SBNO1A3KN83 KRT8P19-201ENST00000551916 1455 ntBASIC21.32■■□□□ 1
SBNO1A3KN83 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SBNO1A3KN83 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SBNO1A3KN83 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.32■■□□□ 1
SBNO1A3KN83 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC21.32■■□□□ 1
SBNO1A3KN83 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SBNO1A3KN83 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SBNO1A3KN83 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC21.32■■□□□ 1
SBNO1A3KN83 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC21.32■■□□□ 1
SBNO1A3KN83 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SBNO1A3KN83 FXNP2-201ENST00000411625 547 ntBASIC21.32■■□□□ 1
SBNO1A3KN83 FNTAP2-201ENST00000430308 634 ntBASIC21.32■■□□□ 1
SBNO1A3KN83 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC21.32■■□□□ 1
SBNO1A3KN83 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC21.32■■□□□ 1
SBNO1A3KN83 UPF3AP2-201ENST00000457924 1132 ntBASIC21.32■■□□□ 1
SBNO1A3KN83 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
SBNO1A3KN83 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC21.32■■□□□ 1
SBNO1A3KN83 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC21.32■■□□□ 1
SBNO1A3KN83 AC138627.1-207ENST00000641560 1006 ntBASIC21.32■■□□□ 1
SBNO1A3KN83 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SBNO1A3KN83 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SBNO1A3KN83 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC21.32■■□□□ 1
SBNO1A3KN83 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SBNO1A3KN83 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SBNO1A3KN83 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SBNO1A3KN83 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SBNO1A3KN83 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SBNO1A3KN83 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SBNO1A3KN83 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
SBNO1A3KN83 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC21.31■■□□□ 1
SBNO1A3KN83 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC21.31■■□□□ 1
SBNO1A3KN83 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC21.31■■□□□ 1
SBNO1A3KN83 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SBNO1A3KN83 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC21.31■■□□□ 1
SBNO1A3KN83 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC21.31■■□□□ 1
SBNO1A3KN83 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SBNO1A3KN83 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SBNO1A3KN83 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SBNO1A3KN83 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SBNO1A3KN83 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC21.31■■□□□ 1
SBNO1A3KN83 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC21.31■■□□□ 1
SBNO1A3KN83 HSPB1P2-201ENST00000448722 546 ntBASIC21.31■■□□□ 1
SBNO1A3KN83 EIF4HP1-201ENST00000453115 687 ntBASIC21.31■■□□□ 1
SBNO1A3KN83 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SBNO1A3KN83 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC21.31■■□□□ 1
SBNO1A3KN83 NAT9-224ENST00000583757 583 ntTSL 3 BASIC21.31■■□□□ 1
SBNO1A3KN83 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.31■■□□□ 1
SBNO1A3KN83 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC21.31■■□□□ 1
SBNO1A3KN83 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 158.1 ms