Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 AL592424.1-201ENST00000563624 1536 ntBASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 AC073621.1-201ENST00000392730 636 ntBASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 AF238378.1-201ENST00000526806 358 ntBASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 AL645728.2-201ENST00000641974 660 ntBASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 AC005622.1-201ENST00000636801 1703 ntBASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PCDHB16Q9NRJ7 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 AC023908.3-201ENST00000564211 3047 ntBASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 AC022532.1-201ENST00000624563 1728 ntBASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
PCDHB16Q9NRJ7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PCDHB16Q9NRJ7 AKR1C7P-201ENST00000305623 895 ntBASIC14.02□□□□□ -0.17
PCDHB16Q9NRJ7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
PCDHB16Q9NRJ7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PCDHB16Q9NRJ7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.02□□□□□ -0.17
PCDHB16Q9NRJ7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PCDHB16Q9NRJ7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.02□□□□□ -0.17
PCDHB16Q9NRJ7 RPS2P1-201ENST00000434010 821 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms