Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.39■□□□□ 0.05
PIF1Q9H611 AF186996.4-201ENST00000467186 377 ntBASIC15.39■□□□□ 0.05
PIF1Q9H611 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.39■□□□□ 0.05
PIF1Q9H611 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PIF1Q9H611 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.39■□□□□ 0.05
PIF1Q9H611 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.39■□□□□ 0.05
PIF1Q9H611 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.39■□□□□ 0.05
PIF1Q9H611 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.39■□□□□ 0.05
PIF1Q9H611 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PIF1Q9H611 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.39■□□□□ 0.05
PIF1Q9H611 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
PIF1Q9H611 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.39■□□□□ 0.05
PIF1Q9H611 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PIF1Q9H611 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PIF1Q9H611 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.39■□□□□ 0.05
PIF1Q9H611 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
PIF1Q9H611 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PIF1Q9H611 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PIF1Q9H611 AC006486.2-201ENST00000624246 2199 ntBASIC15.39■□□□□ 0.05
PIF1Q9H611 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.39■□□□□ 0.05
PIF1Q9H611 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PIF1Q9H611 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PIF1Q9H611 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PIF1Q9H611 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.39■□□□□ 0.05
PIF1Q9H611 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PIF1Q9H611 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PIF1Q9H611 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PIF1Q9H611 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PIF1Q9H611 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PIF1Q9H611 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PIF1Q9H611 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.38■□□□□ 0.05
PIF1Q9H611 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PIF1Q9H611 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PIF1Q9H611 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PIF1Q9H611 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.38■□□□□ 0.05
PIF1Q9H611 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.38■□□□□ 0.05
PIF1Q9H611 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PIF1Q9H611 AC008677.1-201ENST00000519230 1561 ntBASIC15.38■□□□□ 0.05
PIF1Q9H611 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PIF1Q9H611 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PIF1Q9H611 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.38■□□□□ 0.05
PIF1Q9H611 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.38■□□□□ 0.05
PIF1Q9H611 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.38■□□□□ 0.05
PIF1Q9H611 AC073621.1-201ENST00000392730 636 ntBASIC15.38■□□□□ 0.05
PIF1Q9H611 KRT18P67-201ENST00000432816 1264 ntBASIC15.38■□□□□ 0.05
PIF1Q9H611 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.38■□□□□ 0.05
PIF1Q9H611 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PIF1Q9H611 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.38■□□□□ 0.05
PIF1Q9H611 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PIF1Q9H611 AL662844.1-201ENST00000546340 181 ntBASIC15.38■□□□□ 0.05
PIF1Q9H611 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.38■□□□□ 0.05
PIF1Q9H611 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.38■□□□□ 0.05
PIF1Q9H611 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.38■□□□□ 0.05
PIF1Q9H611 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PIF1Q9H611 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
PIF1Q9H611 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PIF1Q9H611 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PIF1Q9H611 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.38■□□□□ 0.05
PIF1Q9H611 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
PIF1Q9H611 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
PIF1Q9H611 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PIF1Q9H611 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PIF1Q9H611 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PIF1Q9H611 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PIF1Q9H611 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.38■□□□□ 0.05
PIF1Q9H611 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PIF1Q9H611 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PIF1Q9H611 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PIF1Q9H611 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PIF1Q9H611 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PIF1Q9H611 AC007686.3-201ENST00000619017 3487 ntBASIC15.37■□□□□ 0.05
PIF1Q9H611 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PIF1Q9H611 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PIF1Q9H611 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.37■□□□□ 0.05
PIF1Q9H611 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PIF1Q9H611 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.37■□□□□ 0.05
PIF1Q9H611 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PIF1Q9H611 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PIF1Q9H611 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.37■□□□□ 0.05
PIF1Q9H611 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PIF1Q9H611 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.37■□□□□ 0.05
PIF1Q9H611 KRT18P27-201ENST00000427733 1299 ntBASIC15.37■□□□□ 0.05
PIF1Q9H611 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PIF1Q9H611 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.37■□□□□ 0.05
PIF1Q9H611 FAM197Y8-203ENST00000450145 560 ntBASIC15.37■□□□□ 0.05
PIF1Q9H611 RNPS1P1-201ENST00000507437 918 ntBASIC15.37■□□□□ 0.05
PIF1Q9H611 AC136632.2-201ENST00000512891 861 ntBASIC15.37■□□□□ 0.05
PIF1Q9H611 OR7E14P-202ENST00000530490 1290 ntBASIC15.37■□□□□ 0.05
PIF1Q9H611 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PIF1Q9H611 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.37■□□□□ 0.05
PIF1Q9H611 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.37■□□□□ 0.05
PIF1Q9H611 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.37■□□□□ 0.05
PIF1Q9H611 AC104692.2-201ENST00000603054 253 ntBASIC15.37■□□□□ 0.05
PIF1Q9H611 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PIF1Q9H611 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.37■□□□□ 0.05
PIF1Q9H611 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PIF1Q9H611 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PIF1Q9H611 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
PIF1Q9H611 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.37■□□□□ 0.05
PIF1Q9H611 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms