Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK3Q9H422 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK3Q9H422 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK3Q9H422 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.37■□□□□ 0.37
HIPK3Q9H422 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK3Q9H422 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.37■□□□□ 0.37
HIPK3Q9H422 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK3Q9H422 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK3Q9H422 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK3Q9H422 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK3Q9H422 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK3Q9H422 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK3Q9H422 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.37■□□□□ 0.37
HIPK3Q9H422 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.37■□□□□ 0.37
HIPK3Q9H422 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.37■□□□□ 0.37
HIPK3Q9H422 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HIPK3Q9H422 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.37■□□□□ 0.37
HIPK3Q9H422 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.37■□□□□ 0.37
HIPK3Q9H422 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.37■□□□□ 0.37
HIPK3Q9H422 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK3Q9H422 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HIPK3Q9H422 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.37■□□□□ 0.37
HIPK3Q9H422 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK3Q9H422 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.37■□□□□ 0.37
HIPK3Q9H422 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.37■□□□□ 0.37
HIPK3Q9H422 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.37■□□□□ 0.37
HIPK3Q9H422 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.37■□□□□ 0.37
HIPK3Q9H422 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.37■□□□□ 0.37
HIPK3Q9H422 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK3Q9H422 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK3Q9H422 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.37■□□□□ 0.37
HIPK3Q9H422 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK3Q9H422 AC080080.1-201ENST00000625121 2420 ntBASIC17.37■□□□□ 0.37
HIPK3Q9H422 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HIPK3Q9H422 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK3Q9H422 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK3Q9H422 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HIPK3Q9H422 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HIPK3Q9H422 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.36■□□□□ 0.37
HIPK3Q9H422 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 AC092506.1-202ENST00000401022 528 ntBASIC17.36■□□□□ 0.37
HIPK3Q9H422 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.36■□□□□ 0.37
HIPK3Q9H422 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.36■□□□□ 0.37
HIPK3Q9H422 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.36■□□□□ 0.37
HIPK3Q9H422 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.36■□□□□ 0.37
HIPK3Q9H422 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.36■□□□□ 0.37
HIPK3Q9H422 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.36■□□□□ 0.37
HIPK3Q9H422 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HIPK3Q9H422 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HIPK3Q9H422 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.36■□□□□ 0.37
HIPK3Q9H422 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.36■□□□□ 0.37
HIPK3Q9H422 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.36■□□□□ 0.37
HIPK3Q9H422 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.36■□□□□ 0.37
HIPK3Q9H422 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.36■□□□□ 0.37
HIPK3Q9H422 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK3Q9H422 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HIPK3Q9H422 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.35■□□□□ 0.37
HIPK3Q9H422 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIPK3Q9H422 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.35■□□□□ 0.37
HIPK3Q9H422 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIPK3Q9H422 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIPK3Q9H422 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HIPK3Q9H422 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIPK3Q9H422 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIPK3Q9H422 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HIPK3Q9H422 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIPK3Q9H422 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIPK3Q9H422 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HIPK3Q9H422 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIPK3Q9H422 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIPK3Q9H422 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIPK3Q9H422 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.35■□□□□ 0.37
HIPK3Q9H422 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.35■□□□□ 0.37
HIPK3Q9H422 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.35■□□□□ 0.37
HIPK3Q9H422 FAM86HP-204ENST00000513466 959 ntBASIC17.35■□□□□ 0.37
HIPK3Q9H422 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms