Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH11XQ9BZA7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH11XQ9BZA7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDH11XQ9BZA7 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH11XQ9BZA7 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH11XQ9BZA7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH11XQ9BZA7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
PCDH11XQ9BZA7 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC20.49■□□□□ 0.87
PCDH11XQ9BZA7 Z93015.1-201ENST00000451718 390 ntBASIC20.49■□□□□ 0.87
PCDH11XQ9BZA7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDH11XQ9BZA7 AC078819.1-201ENST00000547454 765 ntBASIC20.49■□□□□ 0.87
PCDH11XQ9BZA7 AC012085.1-201ENST00000548270 765 ntBASIC20.49■□□□□ 0.87
PCDH11XQ9BZA7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC20.49■□□□□ 0.87
PCDH11XQ9BZA7 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDH11XQ9BZA7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 AL138709.1-201ENST00000614840 1693 ntBASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 AL118558.3-201ENST00000607414 1079 ntBASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH11XQ9BZA7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDH11XQ9BZA7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH11XQ9BZA7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH11XQ9BZA7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH11XQ9BZA7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH11XQ9BZA7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH11XQ9BZA7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PCDH11XQ9BZA7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDH11XQ9BZA7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH11XQ9BZA7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH11XQ9BZA7 MIR648-201ENST00000385046 94 ntBASIC20.47■□□□□ 0.87
PCDH11XQ9BZA7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC20.47■□□□□ 0.87
PCDH11XQ9BZA7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDH11XQ9BZA7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDH11XQ9BZA7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDH11XQ9BZA7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH11XQ9BZA7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH11XQ9BZA7 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
PCDH11XQ9BZA7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 AC106886.4-201ENST00000623557 2502 ntBASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 AGER-203ENST00000375065 665 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 AC145423.3-201ENST00000615987 467 ntBASIC20.46■□□□□ 0.87
PCDH11XQ9BZA7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms