Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 AC092384.3-202ENST00000564646 2873 ntBASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 GNAQP1-201ENST00000444815 1067 ntBASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 GIMAP3P-201ENST00000495150 836 ntBASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.35■□□□□ 0.69
RPAP1Q9BWH6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 DGCR5-201ENST00000399539 862 ntBASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 AC099568.2-201ENST00000609194 695 ntBASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 AL033527.5-202ENST00000641632 1098 ntBASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 AC104640.1-201ENST00000562617 2109 ntBASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPAP1Q9BWH6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPAP1Q9BWH6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
RPAP1Q9BWH6 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPAP1Q9BWH6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPAP1Q9BWH6 SPDYE19P-201ENST00000338590 713 ntBASIC19.33■□□□□ 0.69
RPAP1Q9BWH6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RPAP1Q9BWH6 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
RPAP1Q9BWH6 AL139010.1-201ENST00000454878 894 ntBASIC19.33■□□□□ 0.69
RPAP1Q9BWH6 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RPAP1Q9BWH6 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.33■□□□□ 0.69
RPAP1Q9BWH6 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RPAP1Q9BWH6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.33■□□□□ 0.69
RPAP1Q9BWH6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.33■□□□□ 0.69
RPAP1Q9BWH6 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RPAP1Q9BWH6 AC007431.3-201ENST00000623221 587 ntBASIC19.33■□□□□ 0.69
RPAP1Q9BWH6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.33■□□□□ 0.69
RPAP1Q9BWH6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPAP1Q9BWH6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.33■□□□□ 0.69
RPAP1Q9BWH6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
RPAP1Q9BWH6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPAP1Q9BWH6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.33■□□□□ 0.69
RPAP1Q9BWH6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms