Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 AC018695.7-201ENST00000624587 2492 ntBASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 AC104596.2-201ENST00000512793 793 ntBASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 AC092552.1-201ENST00000547243 906 ntBASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 TMEM261P1-201ENST00000604899 340 ntBASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 AL391069.4-201ENST00000609583 481 ntBASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85AQ96PX6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CCDC85AQ96PX6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC85AQ96PX6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC85AQ96PX6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC85AQ96PX6 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC85AQ96PX6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC85AQ96PX6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC85AQ96PX6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC85AQ96PX6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC85AQ96PX6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC85AQ96PX6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC85AQ96PX6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC85AQ96PX6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC85AQ96PX6 MIR1909-201ENST00000411312 80 ntBASIC19.77■□□□□ 0.76
CCDC85AQ96PX6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC85AQ96PX6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC85AQ96PX6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC85AQ96PX6 RAB43P1-201ENST00000561790 589 ntBASIC19.77■□□□□ 0.76
CCDC85AQ96PX6 AL162274.1-201ENST00000617191 1098 ntBASIC19.77■□□□□ 0.76
CCDC85AQ96PX6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC85AQ96PX6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC85AQ96PX6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC85AQ96PX6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms