Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.3■□□□□ 0.2
RTP4Q96DX8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTP4Q96DX8 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RTP4Q96DX8 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RTP4Q96DX8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTP4Q96DX8 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.3■□□□□ 0.2
RTP4Q96DX8 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RTP4Q96DX8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTP4Q96DX8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTP4Q96DX8 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.29■□□□□ 0.2
RTP4Q96DX8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTP4Q96DX8 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RTP4Q96DX8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
RTP4Q96DX8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RTP4Q96DX8 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RTP4Q96DX8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTP4Q96DX8 AC138035.3-201ENST00000622706 2791 ntBASIC16.29■□□□□ 0.2
RTP4Q96DX8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTP4Q96DX8 AC127383.1-201ENST00000444697 1800 ntBASIC16.29■□□□□ 0.2
RTP4Q96DX8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTP4Q96DX8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.29■□□□□ 0.2
RTP4Q96DX8 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTP4Q96DX8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTP4Q96DX8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.29■□□□□ 0.2
RTP4Q96DX8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTP4Q96DX8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTP4Q96DX8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
RTP4Q96DX8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTP4Q96DX8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.29■□□□□ 0.2
RTP4Q96DX8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTP4Q96DX8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.29■□□□□ 0.2
RTP4Q96DX8 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RTP4Q96DX8 HNRNPUP1-201ENST00000554987 333 ntBASIC16.29■□□□□ 0.2
RTP4Q96DX8 AC022145.2-201ENST00000598203 171 ntBASIC16.29■□□□□ 0.2
RTP4Q96DX8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTP4Q96DX8 AC105339.1-204ENST00000636249 355 ntBASIC16.29■□□□□ 0.2
RTP4Q96DX8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTP4Q96DX8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RTP4Q96DX8 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTP4Q96DX8 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RTP4Q96DX8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RTP4Q96DX8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTP4Q96DX8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTP4Q96DX8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTP4Q96DX8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTP4Q96DX8 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.29■□□□□ 0.2
RTP4Q96DX8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTP4Q96DX8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.29■□□□□ 0.2
RTP4Q96DX8 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTP4Q96DX8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
RTP4Q96DX8 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
RTP4Q96DX8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.28■□□□□ 0.2
RTP4Q96DX8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.28■□□□□ 0.2
RTP4Q96DX8 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.28■□□□□ 0.2
RTP4Q96DX8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.28■□□□□ 0.2
RTP4Q96DX8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.28■□□□□ 0.2
RTP4Q96DX8 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RTP4Q96DX8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RTP4Q96DX8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 TSEN15P1-201ENST00000423257 515 ntBASIC16.28■□□□□ 0.2
RTP4Q96DX8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.28■□□□□ 0.2
RTP4Q96DX8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.28■□□□□ 0.2
RTP4Q96DX8 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RTP4Q96DX8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.28■□□□□ 0.2
RTP4Q96DX8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.28■□□□□ 0.2
RTP4Q96DX8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.28■□□□□ 0.2
RTP4Q96DX8 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.28■□□□□ 0.2
RTP4Q96DX8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.28■□□□□ 0.2
RTP4Q96DX8 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 AL513210.1-201ENST00000629608 234 ntBASIC16.28■□□□□ 0.2
RTP4Q96DX8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.28■□□□□ 0.2
RTP4Q96DX8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 UXT-AS1-201ENST00000590504 1525 ntBASIC16.28■□□□□ 0.2
RTP4Q96DX8 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.28■□□□□ 0.2
RTP4Q96DX8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
RTP4Q96DX8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTP4Q96DX8 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTP4Q96DX8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTP4Q96DX8 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms