Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 FO681548.1-201ENST00000455617 1132 ntBASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 PFN1P12-201ENST00000455938 534 ntBASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 RHOQP1-201ENST00000555758 579 ntBASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 AC024267.1-201ENST00000582320 895 ntBASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 AC005229.1-201ENST00000392885 409 ntBASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 TIMM17BP1-201ENST00000545713 516 ntBASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 AC243960.2-201ENST00000600996 747 ntBASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
U2AF1L4Q8WU68 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
U2AF1L4Q8WU68 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
U2AF1L4Q8WU68 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
U2AF1L4Q8WU68 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
U2AF1L4Q8WU68 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.27■□□□□ 0.51
U2AF1L4Q8WU68 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
U2AF1L4Q8WU68 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.27■□□□□ 0.51
U2AF1L4Q8WU68 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 MIR1247-201ENST00000408206 136 ntBASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 GPAA1P2-201ENST00000417923 928 ntBASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 RN7SL190P-201ENST00000582519 257 ntBASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 AL022328.1-201ENST00000610050 478 ntBASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.26■□□□□ 0.51
U2AF1L4Q8WU68 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms