Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 HAUS4P1-201ENST00000406739 1145 ntBASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 FAM201B-201ENST00000458407 597 ntBASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 AC091167.2-201ENST00000579581 588 ntBASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 FGF14-AS2-201ENST00000606448 1074 ntBASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 TNN-203ENST00000622870 3719 ntTSL 5 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC10.45□□□□□ -0.74
SMIM11BQ8TCY0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 SPDYE21P-201ENST00000413323 827 ntBASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC10.44□□□□□ -0.74
SMIM11BQ8TCY0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms