Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PROM2Q8N271 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC20.14■□□□□ 0.81
PROM2Q8N271 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PROM2Q8N271 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.14■□□□□ 0.81
PROM2Q8N271 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PROM2Q8N271 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC20.14■□□□□ 0.81
PROM2Q8N271 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.14■□□□□ 0.81
PROM2Q8N271 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PROM2Q8N271 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PROM2Q8N271 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PROM2Q8N271 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC20.14■□□□□ 0.81
PROM2Q8N271 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC20.14■□□□□ 0.81
PROM2Q8N271 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PROM2Q8N271 KRT8P35-201ENST00000483942 1338 ntBASIC20.14■□□□□ 0.81
PROM2Q8N271 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PROM2Q8N271 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PROM2Q8N271 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PROM2Q8N271 SERPINA13P-202ENST00000478994 924 ntBASIC20.14■□□□□ 0.81
PROM2Q8N271 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PROM2Q8N271 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC20.14■□□□□ 0.81
PROM2Q8N271 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC20.14■□□□□ 0.81
PROM2Q8N271 ECM1P1-201ENST00000604092 1279 ntBASIC20.14■□□□□ 0.81
PROM2Q8N271 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PROM2Q8N271 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PROM2Q8N271 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.14■□□□□ 0.81
PROM2Q8N271 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PROM2Q8N271 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PROM2Q8N271 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.14■□□□□ 0.81
PROM2Q8N271 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PROM2Q8N271 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.14■□□□□ 0.81
PROM2Q8N271 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PROM2Q8N271 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PROM2Q8N271 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PROM2Q8N271 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.13■□□□□ 0.81
PROM2Q8N271 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.13■□□□□ 0.81
PROM2Q8N271 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PROM2Q8N271 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PROM2Q8N271 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PROM2Q8N271 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC20.13■□□□□ 0.81
PROM2Q8N271 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.13■□□□□ 0.81
PROM2Q8N271 FOS-202ENST00000535987 1402 ntTSL 2 BASIC20.13■□□□□ 0.81
PROM2Q8N271 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PROM2Q8N271 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PROM2Q8N271 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PROM2Q8N271 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PROM2Q8N271 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC20.13■□□□□ 0.81
PROM2Q8N271 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC20.13■□□□□ 0.81
PROM2Q8N271 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC20.13■□□□□ 0.81
PROM2Q8N271 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PROM2Q8N271 TISP43-201ENST00000409793 538 ntTSL 4 BASIC20.13■□□□□ 0.81
PROM2Q8N271 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
PROM2Q8N271 SUPT4H1P2-201ENST00000501248 353 ntBASIC20.13■□□□□ 0.81
PROM2Q8N271 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC20.13■□□□□ 0.81
PROM2Q8N271 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PROM2Q8N271 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
PROM2Q8N271 AC097359.3-201ENST00000603982 1210 ntBASIC20.13■□□□□ 0.81
PROM2Q8N271 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC20.13■□□□□ 0.81
PROM2Q8N271 AC007663.3-201ENST00000609632 465 ntBASIC20.13■□□□□ 0.81
PROM2Q8N271 HLA-C-210ENST00000640219 976 ntBASIC20.13■□□□□ 0.81
PROM2Q8N271 AL133373.2-201ENST00000623187 2828 ntBASIC20.13■□□□□ 0.81
PROM2Q8N271 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PROM2Q8N271 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PROM2Q8N271 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC20.12■□□□□ 0.81
PROM2Q8N271 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PROM2Q8N271 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PROM2Q8N271 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PROM2Q8N271 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC20.12■□□□□ 0.81
PROM2Q8N271 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PROM2Q8N271 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.12■□□□□ 0.81
PROM2Q8N271 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PROM2Q8N271 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PROM2Q8N271 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PROM2Q8N271 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PROM2Q8N271 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.12■□□□□ 0.81
PROM2Q8N271 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PROM2Q8N271 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC20.12■□□□□ 0.81
PROM2Q8N271 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PROM2Q8N271 KRT18P43-201ENST00000469825 1281 ntBASIC20.12■□□□□ 0.81
PROM2Q8N271 KRT18P25-201ENST00000508931 1278 ntBASIC20.12■□□□□ 0.81
PROM2Q8N271 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PROM2Q8N271 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC20.12■□□□□ 0.81
PROM2Q8N271 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC20.12■□□□□ 0.81
PROM2Q8N271 AL137246.1-201ENST00000607072 977 ntBASIC20.12■□□□□ 0.81
PROM2Q8N271 AL353726.2-201ENST00000623259 884 ntBASIC20.12■□□□□ 0.81
PROM2Q8N271 AC027281.2-201ENST00000623856 713 ntBASIC20.12■□□□□ 0.81
PROM2Q8N271 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.12■□□□□ 0.81
PROM2Q8N271 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC20.12■□□□□ 0.81
PROM2Q8N271 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC20.12■□□□□ 0.81
PROM2Q8N271 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PROM2Q8N271 GGT3P-204ENST00000453783 1664 ntBASIC20.12■□□□□ 0.81
PROM2Q8N271 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.12■□□□□ 0.81
PROM2Q8N271 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PROM2Q8N271 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PROM2Q8N271 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PROM2Q8N271 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.12■□□□□ 0.81
PROM2Q8N271 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PROM2Q8N271 CYP2AB1P-202ENST00000454440 1456 ntBASIC20.11■□□□□ 0.81
PROM2Q8N271 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.11■□□□□ 0.81
PROM2Q8N271 AC008132.1-202ENST00000342005 1389 ntBASIC20.11■□□□□ 0.81
PROM2Q8N271 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms