Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 KRT8P35-201ENST00000483942 1338 ntBASIC16.16■□□□□ 0.18
DENND4AQ7Z401 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4AQ7Z401 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 MIR3619-201ENST00000579667 83 ntBASIC16.15■□□□□ 0.18
DENND4AQ7Z401 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
DENND4AQ7Z401 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 AC023310.1-201ENST00000554836 735 ntBASIC16.14■□□□□ 0.17
DENND4AQ7Z401 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 AC138627.1-207ENST00000641560 1006 ntBASIC16.14■□□□□ 0.17
DENND4AQ7Z401 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 AC091812.3-201ENST00000621362 345 ntBASIC16.14■□□□□ 0.17
DENND4AQ7Z401 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
DENND4AQ7Z401 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 ALOX12P2-203ENST00000570921 1945 ntBASIC16.13■□□□□ 0.17
DENND4AQ7Z401 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 AC092171.3-201ENST00000610122 2651 ntBASIC16.13■□□□□ 0.17
DENND4AQ7Z401 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.13■□□□□ 0.17
DENND4AQ7Z401 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DENND4AQ7Z401 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms