Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC10.7□□□□□ -0.7
SCXQ7RTU7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC10.7□□□□□ -0.7
SCXQ7RTU7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC10.7□□□□□ -0.7
SCXQ7RTU7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
SCXQ7RTU7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SCXQ7RTU7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
SCXQ7RTU7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC10.7□□□□□ -0.7
SCXQ7RTU7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SCXQ7RTU7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
SCXQ7RTU7 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
SCXQ7RTU7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SCXQ7RTU7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SCXQ7RTU7 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
SCXQ7RTU7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC10.7□□□□□ -0.7
SCXQ7RTU7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC10.7□□□□□ -0.7
SCXQ7RTU7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
SCXQ7RTU7 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SCXQ7RTU7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC10.7□□□□□ -0.7
SCXQ7RTU7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
SCXQ7RTU7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC10.7□□□□□ -0.7
SCXQ7RTU7 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SCXQ7RTU7 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
SCXQ7RTU7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC10.7□□□□□ -0.7
SCXQ7RTU7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 AC022188.1-201ENST00000620960 1664 ntBASIC10.69□□□□□ -0.7
SCXQ7RTU7 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 EGFEM1P-202ENST00000431685 1563 ntBASIC10.69□□□□□ -0.7
SCXQ7RTU7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC10.69□□□□□ -0.7
SCXQ7RTU7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 HNRNPFP1-201ENST00000391730 1133 ntBASIC10.69□□□□□ -0.7
SCXQ7RTU7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 HMGA1P7-201ENST00000406908 502 ntBASIC10.69□□□□□ -0.7
SCXQ7RTU7 TFAMP1-201ENST00000412727 736 ntBASIC10.69□□□□□ -0.7
SCXQ7RTU7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 AC079140.1-201ENST00000508039 487 ntBASIC10.69□□□□□ -0.7
SCXQ7RTU7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 AC093520.2-201ENST00000561830 333 ntBASIC10.69□□□□□ -0.7
SCXQ7RTU7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 AC092364.2-202ENST00000597012 1073 ntBASIC10.69□□□□□ -0.7
SCXQ7RTU7 AL161645.1-201ENST00000622716 1255 ntBASIC10.69□□□□□ -0.7
SCXQ7RTU7 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
SCXQ7RTU7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC10.69□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms