Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 RN7SL11P-201ENST00000471305 293 ntBASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 PRKXP1-201ENST00000561423 1122 ntBASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 AC022748.3-201ENST00000621828 275 ntBASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 IGF1-203ENST00000392904 761 ntTSL 5 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 DEF8-202ENST00000418391 852 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 CENPX-208ENST00000584347 799 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13DQ5THJ4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 PTK2-225ENST00000520892 571 ntTSL 4 BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 AC005730.2-201ENST00000564549 1184 ntBASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 RN7SL713P-201ENST00000582127 302 ntBASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 AL133499.1-201ENST00000596207 608 ntBASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 AP005019.2-201ENST00000615104 511 ntBASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms