Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA8Q53HL2 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC21.96■■□□□ 1.11
CDCA8Q53HL2 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA8Q53HL2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC21.96■■□□□ 1.11
CDCA8Q53HL2 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
CDCA8Q53HL2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC21.96■■□□□ 1.11
CDCA8Q53HL2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC21.96■■□□□ 1.11
CDCA8Q53HL2 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC21.96■■□□□ 1.11
CDCA8Q53HL2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
CDCA8Q53HL2 AL391069.4-201ENST00000609583 481 ntBASIC21.96■■□□□ 1.11
CDCA8Q53HL2 AL358472.5-202ENST00000641448 1267 ntBASIC21.96■■□□□ 1.11
CDCA8Q53HL2 AF228730.6-201ENST00000641497 218 ntBASIC21.96■■□□□ 1.11
CDCA8Q53HL2 AC084121.3-201ENST00000641716 218 ntBASIC21.96■■□□□ 1.11
CDCA8Q53HL2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA8Q53HL2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CDCA8Q53HL2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CDCA8Q53HL2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC21.96■■□□□ 1.11
CDCA8Q53HL2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CDCA8Q53HL2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC21.96■■□□□ 1.11
CDCA8Q53HL2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC21.96■■□□□ 1.11
CDCA8Q53HL2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC21.96■■□□□ 1.11
CDCA8Q53HL2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CDCA8Q53HL2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC21.96■■□□□ 1.11
CDCA8Q53HL2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
CDCA8Q53HL2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 PKIG-203ENST00000372887 769 ntTSL 3 BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 MIR4313-201ENST00000580760 101 ntBASIC21.95■■□□□ 1.1
CDCA8Q53HL2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC21.95■■□□□ 1.1
CDCA8Q53HL2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDCA8Q53HL2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDCA8Q53HL2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDCA8Q53HL2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CDCA8Q53HL2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDCA8Q53HL2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDCA8Q53HL2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDCA8Q53HL2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDCA8Q53HL2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CDCA8Q53HL2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC21.94■■□□□ 1.1
CDCA8Q53HL2 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC21.94■■□□□ 1.1
CDCA8Q53HL2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC21.94■■□□□ 1.1
CDCA8Q53HL2 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC21.94■■□□□ 1.1
CDCA8Q53HL2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC21.94■■□□□ 1.1
CDCA8Q53HL2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CDCA8Q53HL2 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CDCA8Q53HL2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDCA8Q53HL2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDCA8Q53HL2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDCA8Q53HL2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDCA8Q53HL2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDCA8Q53HL2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 AL158212.4-201ENST00000624062 1286 ntBASIC21.93■■□□□ 1.1
CDCA8Q53HL2 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 AC025048.6-201ENST00000634326 1161 ntBASIC21.93■■□□□ 1.1
CDCA8Q53HL2 AC105233.6-201ENST00000642093 218 ntBASIC21.93■■□□□ 1.1
CDCA8Q53HL2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms