Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
TM4SF1P30408 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TM4SF1P30408 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TM4SF1P30408 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
TM4SF1P30408 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TM4SF1P30408 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TM4SF1P30408 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC19.58■□□□□ 0.73
TM4SF1P30408 AC106886.4-201ENST00000623557 2502 ntBASIC19.58■□□□□ 0.73
TM4SF1P30408 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.58■□□□□ 0.73
TM4SF1P30408 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TM4SF1P30408 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TM4SF1P30408 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
TM4SF1P30408 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TM4SF1P30408 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
TM4SF1P30408 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC19.58■□□□□ 0.72
TM4SF1P30408 CSH2-202ENST00000345366 598 ntTSL 5 BASIC19.58■□□□□ 0.72
TM4SF1P30408 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
TM4SF1P30408 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
TM4SF1P30408 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC19.58■□□□□ 0.72
TM4SF1P30408 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
TM4SF1P30408 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC19.58■□□□□ 0.72
TM4SF1P30408 UPF3AP2-201ENST00000457924 1132 ntBASIC19.58■□□□□ 0.72
TM4SF1P30408 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.58■□□□□ 0.72
TM4SF1P30408 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TM4SF1P30408 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC19.58■□□□□ 0.72
TM4SF1P30408 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.58■□□□□ 0.72
TM4SF1P30408 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TM4SF1P30408 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.58■□□□□ 0.72
TM4SF1P30408 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC19.58■□□□□ 0.72
TM4SF1P30408 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TM4SF1P30408 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.58■□□□□ 0.72
TM4SF1P30408 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TM4SF1P30408 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TM4SF1P30408 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TM4SF1P30408 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
TM4SF1P30408 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TM4SF1P30408 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TM4SF1P30408 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TM4SF1P30408 AC018892.3-201ENST00000623986 2499 ntBASIC19.58■□□□□ 0.72
TM4SF1P30408 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF1P30408 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF1P30408 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF1P30408 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TM4SF1P30408 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.57■□□□□ 0.72
TM4SF1P30408 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF1P30408 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC19.57■□□□□ 0.72
TM4SF1P30408 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TM4SF1P30408 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.57■□□□□ 0.72
TM4SF1P30408 RERG-205ENST00000537647 935 ntTSL 2 BASIC19.57■□□□□ 0.72
TM4SF1P30408 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
TM4SF1P30408 AL451050.2-201ENST00000606967 682 ntBASIC19.57■□□□□ 0.72
TM4SF1P30408 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF1P30408 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TM4SF1P30408 FOS-202ENST00000535987 1402 ntTSL 2 BASIC19.57■□□□□ 0.72
TM4SF1P30408 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TM4SF1P30408 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TM4SF1P30408 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF1P30408 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF1P30408 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.57■□□□□ 0.72
TM4SF1P30408 FLJ38576-201ENST00000623820 2459 ntBASIC19.57■□□□□ 0.72
TM4SF1P30408 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.56■□□□□ 0.72
TM4SF1P30408 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF1P30408 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF1P30408 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF1P30408 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF1P30408 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF1P30408 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF1P30408 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF1P30408 HNRNPA1P32-201ENST00000396326 963 ntBASIC19.56■□□□□ 0.72
TM4SF1P30408 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC19.56■□□□□ 0.72
TM4SF1P30408 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC19.56■□□□□ 0.72
TM4SF1P30408 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.56■□□□□ 0.72
TM4SF1P30408 TSACC-208ENST00000481479 741 ntTSL 2 BASIC19.56■□□□□ 0.72
TM4SF1P30408 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF1P30408 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC19.56■□□□□ 0.72
TM4SF1P30408 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC19.56■□□□□ 0.72
TM4SF1P30408 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC19.56■□□□□ 0.72
TM4SF1P30408 NAT9-224ENST00000583757 583 ntTSL 3 BASIC19.56■□□□□ 0.72
TM4SF1P30408 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC19.56■□□□□ 0.72
TM4SF1P30408 HCG18-245ENST00000602550 559 ntTSL 4 BASIC19.56■□□□□ 0.72
TM4SF1P30408 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TM4SF1P30408 BX539320.1-201ENST00000623759 877 ntBASIC19.56■□□□□ 0.72
TM4SF1P30408 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC19.56■□□□□ 0.72
TM4SF1P30408 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.56■□□□□ 0.72
TM4SF1P30408 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF1P30408 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF1P30408 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.56■□□□□ 0.72
TM4SF1P30408 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF1P30408 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF1P30408 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF1P30408 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM4SF1P30408 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC19.55■□□□□ 0.72
TM4SF1P30408 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM4SF1P30408 AC005332.8-201ENST00000622750 2735 ntBASIC19.55■□□□□ 0.72
TM4SF1P30408 KRT8P19-201ENST00000551916 1455 ntBASIC19.55■□□□□ 0.72
TM4SF1P30408 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM4SF1P30408 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TM4SF1P30408 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.55■□□□□ 0.72
TM4SF1P30408 ACTBP8-201ENST00000403258 1108 ntBASIC19.55■□□□□ 0.72
TM4SF1P30408 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms