Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
KCNA3P22001 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KCNA3P22001 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KCNA3P22001 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KCNA3P22001 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNA3P22001 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNA3P22001 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
KCNA3P22001 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNA3P22001 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KCNA3P22001 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNA3P22001 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC19.32■□□□□ 0.68
KCNA3P22001 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNA3P22001 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KCNA3P22001 HNRNPA1P63-201ENST00000427917 963 ntBASIC19.32■□□□□ 0.68
KCNA3P22001 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC19.32■□□□□ 0.68
KCNA3P22001 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KCNA3P22001 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC19.32■□□□□ 0.68
KCNA3P22001 SERPINA13P-202ENST00000478994 924 ntBASIC19.32■□□□□ 0.68
KCNA3P22001 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KCNA3P22001 PRKXP1-201ENST00000561423 1122 ntBASIC19.32■□□□□ 0.68
KCNA3P22001 FGFR3P5-201ENST00000564496 886 ntBASIC19.32■□□□□ 0.68
KCNA3P22001 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.32■□□□□ 0.68
KCNA3P22001 AC138649.2-201ENST00000615886 705 ntBASIC19.32■□□□□ 0.68
KCNA3P22001 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC19.32■□□□□ 0.68
KCNA3P22001 AL138799.1-201ENST00000448213 1675 ntBASIC19.32■□□□□ 0.68
KCNA3P22001 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KCNA3P22001 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNA3P22001 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.32■□□□□ 0.68
KCNA3P22001 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.32■□□□□ 0.68
KCNA3P22001 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNA3P22001 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.32■□□□□ 0.68
KCNA3P22001 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KCNA3P22001 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.31■□□□□ 0.68
KCNA3P22001 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNA3P22001 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC19.31■□□□□ 0.68
KCNA3P22001 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
KCNA3P22001 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNA3P22001 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.31■□□□□ 0.68
KCNA3P22001 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
KCNA3P22001 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNA3P22001 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC19.31■□□□□ 0.68
KCNA3P22001 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNA3P22001 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.31■□□□□ 0.68
KCNA3P22001 TISP43-201ENST00000409793 538 ntTSL 4 BASIC19.31■□□□□ 0.68
KCNA3P22001 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KCNA3P22001 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC19.31■□□□□ 0.68
KCNA3P22001 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KCNA3P22001 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNA3P22001 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC19.31■□□□□ 0.68
KCNA3P22001 AC008267.1-201ENST00000474858 1069 ntBASIC19.31■□□□□ 0.68
KCNA3P22001 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KCNA3P22001 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC19.31■□□□□ 0.68
KCNA3P22001 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC19.31■□□□□ 0.68
KCNA3P22001 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.31■□□□□ 0.68
KCNA3P22001 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC19.31■□□□□ 0.68
KCNA3P22001 AC007663.3-201ENST00000609632 465 ntBASIC19.31■□□□□ 0.68
KCNA3P22001 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
KCNA3P22001 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.31■□□□□ 0.68
KCNA3P22001 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNA3P22001 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KCNA3P22001 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNA3P22001 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
KCNA3P22001 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
KCNA3P22001 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.31■□□□□ 0.68
KCNA3P22001 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
KCNA3P22001 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
KCNA3P22001 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KCNA3P22001 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNA3P22001 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.31■□□□□ 0.68
KCNA3P22001 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNA3P22001 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.3■□□□□ 0.68
KCNA3P22001 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KCNA3P22001 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KCNA3P22001 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KCNA3P22001 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KCNA3P22001 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
KCNA3P22001 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KCNA3P22001 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.3■□□□□ 0.68
KCNA3P22001 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KCNA3P22001 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KCNA3P22001 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.3■□□□□ 0.68
KCNA3P22001 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.3■□□□□ 0.68
KCNA3P22001 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.3■□□□□ 0.68
KCNA3P22001 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KCNA3P22001 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KCNA3P22001 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KCNA3P22001 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
KCNA3P22001 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC19.3■□□□□ 0.68
KCNA3P22001 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
KCNA3P22001 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.3■□□□□ 0.68
KCNA3P22001 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC19.3■□□□□ 0.68
KCNA3P22001 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
KCNA3P22001 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC19.3■□□□□ 0.68
KCNA3P22001 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KCNA3P22001 AP003419.4-201ENST00000616071 517 ntBASIC19.3■□□□□ 0.68
KCNA3P22001 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
KCNA3P22001 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KCNA3P22001 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KCNA3P22001 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KCNA3P22001 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms