Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.38■□□□□ 0.53
SCG2P13521 PRAL-201ENST00000624952 3286 ntBASIC18.38■□□□□ 0.53
SCG2P13521 AC087499.5-201ENST00000452760 1342 ntBASIC18.38■□□□□ 0.53
SCG2P13521 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCG2P13521 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCG2P13521 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SCG2P13521 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCG2P13521 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCG2P13521 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCG2P13521 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.38■□□□□ 0.53
SCG2P13521 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SCG2P13521 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.38■□□□□ 0.53
SCG2P13521 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCG2P13521 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCG2P13521 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.37■□□□□ 0.53
SCG2P13521 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
SCG2P13521 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.37■□□□□ 0.53
SCG2P13521 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCG2P13521 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCG2P13521 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCG2P13521 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCG2P13521 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SCG2P13521 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCG2P13521 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCG2P13521 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCG2P13521 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.37■□□□□ 0.53
SCG2P13521 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCG2P13521 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.37■□□□□ 0.53
SCG2P13521 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.37■□□□□ 0.53
SCG2P13521 RN7SL618P-201ENST00000477850 296 ntBASIC18.37■□□□□ 0.53
SCG2P13521 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.37■□□□□ 0.53
SCG2P13521 AC093214.1-201ENST00000511688 1107 ntBASIC18.37■□□□□ 0.53
SCG2P13521 RNA5SP421-201ENST00000516864 134 ntBASIC18.37■□□□□ 0.53
SCG2P13521 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.37■□□□□ 0.53
SCG2P13521 MIR4745-201ENST00000577608 62 ntBASIC18.37■□□□□ 0.53
SCG2P13521 MIR4313-201ENST00000580760 101 ntBASIC18.37■□□□□ 0.53
SCG2P13521 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCG2P13521 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCG2P13521 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCG2P13521 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCG2P13521 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
SCG2P13521 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.37■□□□□ 0.53
SCG2P13521 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.37■□□□□ 0.53
SCG2P13521 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.37■□□□□ 0.53
SCG2P13521 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.37■□□□□ 0.53
SCG2P13521 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.37■□□□□ 0.53
SCG2P13521 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.37■□□□□ 0.53
SCG2P13521 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCG2P13521 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCG2P13521 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.36■□□□□ 0.53
SCG2P13521 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SCG2P13521 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCG2P13521 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCG2P13521 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCG2P13521 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCG2P13521 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCG2P13521 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCG2P13521 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCG2P13521 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCG2P13521 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCG2P13521 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCG2P13521 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCG2P13521 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCG2P13521 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.36■□□□□ 0.53
SCG2P13521 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.36■□□□□ 0.53
SCG2P13521 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.36■□□□□ 0.53
SCG2P13521 AC136604.1-201ENST00000418535 575 ntBASIC18.36■□□□□ 0.53
SCG2P13521 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
SCG2P13521 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCG2P13521 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.36■□□□□ 0.53
SCG2P13521 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.36■□□□□ 0.53
SCG2P13521 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.36■□□□□ 0.53
SCG2P13521 COX20P2-201ENST00000452636 358 ntBASIC18.36■□□□□ 0.53
SCG2P13521 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.36■□□□□ 0.53
SCG2P13521 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCG2P13521 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.36■□□□□ 0.53
SCG2P13521 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
SCG2P13521 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.36■□□□□ 0.53
SCG2P13521 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SCG2P13521 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCG2P13521 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.36■□□□□ 0.53
SCG2P13521 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.36■□□□□ 0.53
SCG2P13521 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
SCG2P13521 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCG2P13521 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
SCG2P13521 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.36■□□□□ 0.53
SCG2P13521 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SCG2P13521 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.36■□□□□ 0.53
SCG2P13521 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCG2P13521 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCG2P13521 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCG2P13521 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
SCG2P13521 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SCG2P13521 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCG2P13521 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SCG2P13521 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.35■□□□□ 0.53
SCG2P13521 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.35■□□□□ 0.53
SCG2P13521 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCG2P13521 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.35■□□□□ 0.53
SCG2P13521 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms