Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KRT3P12035 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
KRT3P12035 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
KRT3P12035 BNIP3P1-202ENST00000550043 1585 ntBASIC16.9■□□□□ 0.3
KRT3P12035 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
KRT3P12035 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.9■□□□□ 0.3
KRT3P12035 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT3P12035 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KRT3P12035 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT3P12035 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KRT3P12035 AC004987.2-201ENST00000395959 1148 ntBASIC16.9■□□□□ 0.3
KRT3P12035 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KRT3P12035 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.9■□□□□ 0.3
KRT3P12035 RPS8P6-201ENST00000426177 609 ntBASIC16.9■□□□□ 0.3
KRT3P12035 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KRT3P12035 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.9■□□□□ 0.3
KRT3P12035 AL139010.1-201ENST00000454878 894 ntBASIC16.9■□□□□ 0.3
KRT3P12035 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.9■□□□□ 0.3
KRT3P12035 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
KRT3P12035 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT3P12035 AC126755.1-201ENST00000525846 6405 ntBASIC16.9■□□□□ 0.3
KRT3P12035 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT3P12035 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT3P12035 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.9■□□□□ 0.3
KRT3P12035 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT3P12035 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
KRT3P12035 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
KRT3P12035 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT3P12035 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
KRT3P12035 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
KRT3P12035 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.9■□□□□ 0.3
KRT3P12035 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT3P12035 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT3P12035 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
KRT3P12035 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
KRT3P12035 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
KRT3P12035 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.89■□□□□ 0.3
KRT3P12035 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT3P12035 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.89■□□□□ 0.29
KRT3P12035 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
KRT3P12035 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
KRT3P12035 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.89■□□□□ 0.29
KRT3P12035 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.89■□□□□ 0.29
KRT3P12035 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT3P12035 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT3P12035 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT3P12035 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
KRT3P12035 KRT18P13-201ENST00000400056 1290 ntBASIC16.89■□□□□ 0.29
KRT3P12035 AC254562.1-201ENST00000417586 456 ntBASIC16.89■□□□□ 0.29
KRT3P12035 RBPMS2P1-201ENST00000437762 623 ntBASIC16.89■□□□□ 0.29
KRT3P12035 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.89■□□□□ 0.29
KRT3P12035 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.89■□□□□ 0.29
KRT3P12035 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT3P12035 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
KRT3P12035 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
KRT3P12035 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
KRT3P12035 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.89■□□□□ 0.29
KRT3P12035 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.89■□□□□ 0.29
KRT3P12035 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.89■□□□□ 0.29
KRT3P12035 AC026979.3-201ENST00000607315 403 ntBASIC16.89■□□□□ 0.29
KRT3P12035 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.89■□□□□ 0.29
KRT3P12035 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.89■□□□□ 0.29
KRT3P12035 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT3P12035 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT3P12035 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT3P12035 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT3P12035 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KRT3P12035 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT3P12035 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
KRT3P12035 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT3P12035 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.88■□□□□ 0.29
KRT3P12035 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT3P12035 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.88■□□□□ 0.29
KRT3P12035 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
KRT3P12035 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT3P12035 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT3P12035 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT3P12035 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT3P12035 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT3P12035 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT3P12035 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT3P12035 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT3P12035 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT3P12035 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT3P12035 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
KRT3P12035 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT3P12035 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT3P12035 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.88■□□□□ 0.29
KRT3P12035 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT3P12035 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT3P12035 GPS2P2-201ENST00000430745 888 ntBASIC16.88■□□□□ 0.29
KRT3P12035 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.88■□□□□ 0.29
KRT3P12035 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.88■□□□□ 0.29
KRT3P12035 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.88■□□□□ 0.29
KRT3P12035 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT3P12035 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT3P12035 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.88■□□□□ 0.29
KRT3P12035 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
KRT3P12035 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.88■□□□□ 0.29
KRT3P12035 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms