Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 AL592424.1-201ENST00000563624 1536 ntBASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 HIST3H2BA-201ENST00000436555 524 ntBASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 TIMM17BP1-201ENST00000545713 516 ntBASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 RRP7BP-205ENST00000566851 833 ntBASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 AC025048.3-201ENST00000590609 569 ntBASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 AC005702.4-201ENST00000618393 416 ntBASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
RAB40ALP0C0E4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.08■□□□□ 0.01
RAB40ALP0C0E4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RAB40ALP0C0E4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
RAB40ALP0C0E4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.08■□□□□ 0.01
RAB40ALP0C0E4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.08■□□□□ 0
RAB40ALP0C0E4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
RAB40ALP0C0E4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAB40ALP0C0E4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40ALP0C0E4 AC078925.2-201ENST00000624013 1973 ntBASIC15.08■□□□□ 0
RAB40ALP0C0E4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.08■□□□□ 0
RAB40ALP0C0E4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40ALP0C0E4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.08■□□□□ 0
RAB40ALP0C0E4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40ALP0C0E4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.08■□□□□ 0
RAB40ALP0C0E4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
RAB40ALP0C0E4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.08■□□□□ 0
RAB40ALP0C0E4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.08■□□□□ 0
RAB40ALP0C0E4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.08■□□□□ 0
RAB40ALP0C0E4 RN7SL752P-201ENST00000463779 287 ntBASIC15.08■□□□□ 0
RAB40ALP0C0E4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAB40ALP0C0E4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.08■□□□□ 0
RAB40ALP0C0E4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
RAB40ALP0C0E4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.08■□□□□ 0
RAB40ALP0C0E4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.08■□□□□ 0
RAB40ALP0C0E4 AC008494.3-201ENST00000606615 944 ntBASIC15.08■□□□□ 0
RAB40ALP0C0E4 AC007431.3-201ENST00000623221 587 ntBASIC15.08■□□□□ 0
RAB40ALP0C0E4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.08■□□□□ 0
RAB40ALP0C0E4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40ALP0C0E4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40ALP0C0E4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
RAB40ALP0C0E4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.08■□□□□ 0
RAB40ALP0C0E4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.08■□□□□ 0
RAB40ALP0C0E4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAB40ALP0C0E4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.08■□□□□ 0
RAB40ALP0C0E4 LINC02199-201ENST00000506655 2702 ntBASIC15.08■□□□□ 0
RAB40ALP0C0E4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40ALP0C0E4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RAB40ALP0C0E4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40ALP0C0E4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40ALP0C0E4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40ALP0C0E4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB40ALP0C0E4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40ALP0C0E4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40ALP0C0E4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB40ALP0C0E4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB40ALP0C0E4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms