Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 AL162726.2-201ENST00000438986 1017 ntBASIC19.14■□□□□ 0.65
SEMA3EO15041 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC19.14■□□□□ 0.65
SEMA3EO15041 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.14■□□□□ 0.65
SEMA3EO15041 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC19.14■□□□□ 0.65
SEMA3EO15041 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SEMA3EO15041 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19.14■□□□□ 0.65
SEMA3EO15041 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.14■□□□□ 0.65
SEMA3EO15041 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.14■□□□□ 0.65
SEMA3EO15041 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.14■□□□□ 0.65
SEMA3EO15041 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.14■□□□□ 0.65
SEMA3EO15041 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEMA3EO15041 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.14■□□□□ 0.65
SEMA3EO15041 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SEMA3EO15041 PCDHB19P-201ENST00000570871 2371 ntBASIC19.14■□□□□ 0.65
SEMA3EO15041 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SEMA3EO15041 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEMA3EO15041 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.14■□□□□ 0.65
SEMA3EO15041 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.14■□□□□ 0.65
SEMA3EO15041 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SEMA3EO15041 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEMA3EO15041 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEMA3EO15041 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEMA3EO15041 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.14■□□□□ 0.65
SEMA3EO15041 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.14■□□□□ 0.65
SEMA3EO15041 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA3EO15041 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA3EO15041 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.13■□□□□ 0.65
SEMA3EO15041 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.13■□□□□ 0.65
SEMA3EO15041 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA3EO15041 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SEMA3EO15041 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA3EO15041 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
SEMA3EO15041 ARSEP1-201ENST00000420443 635 ntBASIC19.13■□□□□ 0.65
SEMA3EO15041 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC19.13■□□□□ 0.65
SEMA3EO15041 AC015936.2-201ENST00000593177 259 ntBASIC19.13■□□□□ 0.65
SEMA3EO15041 AC133539.2-201ENST00000604757 467 ntBASIC19.13■□□□□ 0.65
SEMA3EO15041 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA3EO15041 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA3EO15041 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC19.13■□□□□ 0.65
SEMA3EO15041 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.13■□□□□ 0.65
SEMA3EO15041 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA3EO15041 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.13■□□□□ 0.65
SEMA3EO15041 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA3EO15041 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA3EO15041 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.13■□□□□ 0.65
SEMA3EO15041 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA3EO15041 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.13■□□□□ 0.65
SEMA3EO15041 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA3EO15041 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.13■□□□□ 0.65
SEMA3EO15041 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
SEMA3EO15041 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA3EO15041 AC018892.3-201ENST00000623986 2499 ntBASIC19.13■□□□□ 0.65
SEMA3EO15041 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA3EO15041 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.12■□□□□ 0.65
SEMA3EO15041 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
SEMA3EO15041 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.12■□□□□ 0.65
SEMA3EO15041 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.12■□□□□ 0.65
SEMA3EO15041 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.12■□□□□ 0.65
SEMA3EO15041 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA3EO15041 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SEMA3EO15041 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.12■□□□□ 0.65
SEMA3EO15041 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SEMA3EO15041 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA3EO15041 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA3EO15041 AL121723.1-201ENST00000445194 1519 ntBASIC19.12■□□□□ 0.65
SEMA3EO15041 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA3EO15041 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA3EO15041 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA3EO15041 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
SEMA3EO15041 AC079776.1-201ENST00000401540 1152 ntBASIC19.12■□□□□ 0.65
SEMA3EO15041 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC19.12■□□□□ 0.65
SEMA3EO15041 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA3EO15041 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.12■□□□□ 0.65
SEMA3EO15041 AL359881.2-201ENST00000602973 570 ntBASIC19.12■□□□□ 0.65
SEMA3EO15041 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.12■□□□□ 0.65
SEMA3EO15041 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19.12■□□□□ 0.65
SEMA3EO15041 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA3EO15041 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA3EO15041 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.12■□□□□ 0.65
SEMA3EO15041 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA3EO15041 AC092364.2-201ENST00000596710 2692 ntBASIC19.12■□□□□ 0.65
SEMA3EO15041 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA3EO15041 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA3EO15041 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA3EO15041 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA3EO15041 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA3EO15041 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA3EO15041 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.11■□□□□ 0.65
SEMA3EO15041 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SEMA3EO15041 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.11■□□□□ 0.65
SEMA3EO15041 KRT8P22-201ENST00000562317 1415 ntBASIC19.11■□□□□ 0.65
SEMA3EO15041 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA3EO15041 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
SEMA3EO15041 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.11■□□□□ 0.65
SEMA3EO15041 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA3EO15041 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SEMA3EO15041 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.11■□□□□ 0.65
SEMA3EO15041 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA3EO15041 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SEMA3EO15041 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms