Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC25.15■■□□□ 1.62
CHD1O14646 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC25.15■■□□□ 1.62
CHD1O14646 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
CHD1O14646 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC25.15■■□□□ 1.62
CHD1O14646 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC25.15■■□□□ 1.62
CHD1O14646 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHD1O14646 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC25.15■■□□□ 1.62
CHD1O14646 AP003392.6-201ENST00000607709 325 ntBASIC25.15■■□□□ 1.62
CHD1O14646 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC25.15■■□□□ 1.62
CHD1O14646 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHD1O14646 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC25.15■■□□□ 1.62
CHD1O14646 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHD1O14646 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHD1O14646 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC25.15■■□□□ 1.62
CHD1O14646 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHD1O14646 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHD1O14646 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC25.15■■□□□ 1.62
CHD1O14646 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
CHD1O14646 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHD1O14646 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC25.15■■□□□ 1.62
CHD1O14646 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC25.15■■□□□ 1.62
CHD1O14646 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC25.15■■□□□ 1.62
CHD1O14646 FAU-202ENST00000434372 533 ntTSL 2 BASIC25.15■■□□□ 1.62
CHD1O14646 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC25.15■■□□□ 1.62
CHD1O14646 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC25.15■■□□□ 1.62
CHD1O14646 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CHD1O14646 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.62
CHD1O14646 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CHD1O14646 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CHD1O14646 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CHD1O14646 OR2K2-202ENST00000374428 1038 ntBASIC25.14■■□□□ 1.61
CHD1O14646 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CHD1O14646 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC25.14■■□□□ 1.61
CHD1O14646 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CHD1O14646 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC25.14■■□□□ 1.61
CHD1O14646 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC25.14■■□□□ 1.61
CHD1O14646 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CHD1O14646 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC25.13■■□□□ 1.61
CHD1O14646 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC25.13■■□□□ 1.61
CHD1O14646 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
CHD1O14646 AC022188.1-201ENST00000620960 1664 ntBASIC25.13■■□□□ 1.61
CHD1O14646 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHD1O14646 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHD1O14646 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CHD1O14646 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC25.13■■□□□ 1.61
CHD1O14646 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC25.13■■□□□ 1.61
CHD1O14646 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC25.13■■□□□ 1.61
CHD1O14646 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CHD1O14646 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC25.13■■□□□ 1.61
CHD1O14646 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC25.13■■□□□ 1.61
CHD1O14646 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
CHD1O14646 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
CHD1O14646 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC25.13■■□□□ 1.61
CHD1O14646 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
CHD1O14646 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CHD1O14646 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHD1O14646 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHD1O14646 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CHD1O14646 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHD1O14646 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHD1O14646 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CHD1O14646 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHD1O14646 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHD1O14646 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHD1O14646 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
CHD1O14646 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHD1O14646 AC012362.1-201ENST00000434906 739 ntBASIC25.12■■□□□ 1.61
CHD1O14646 RPL18AP3-201ENST00000462885 528 ntBASIC25.12■■□□□ 1.61
CHD1O14646 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC25.12■■□□□ 1.61
CHD1O14646 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC25.12■■□□□ 1.61
CHD1O14646 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC25.12■■□□□ 1.61
CHD1O14646 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC25.12■■□□□ 1.61
CHD1O14646 AL136295.7-201ENST00000619226 1200 ntBASIC25.12■■□□□ 1.61
CHD1O14646 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC25.12■■□□□ 1.61
CHD1O14646 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
CHD1O14646 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC25.12■■□□□ 1.61
CHD1O14646 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CHD1O14646 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC25.12■■□□□ 1.61
CHD1O14646 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHD1O14646 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHD1O14646 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHD1O14646 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CHD1O14646 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC25.12■■□□□ 1.61
CHD1O14646 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC25.12■■□□□ 1.61
CHD1O14646 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHD1O14646 SOD2-202ENST00000367054 815 ntTSL 2 BASIC25.12■■□□□ 1.61
CHD1O14646 AP000356.3-201ENST00000382243 753 ntBASIC25.12■■□□□ 1.61
CHD1O14646 HNRNPA1P41-201ENST00000397777 928 ntBASIC25.12■■□□□ 1.61
CHD1O14646 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC25.12■■□□□ 1.61
CHD1O14646 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHD1O14646 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC25.12■■□□□ 1.61
CHD1O14646 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CHD1O14646 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CHD1O14646 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC25.12■■□□□ 1.61
CHD1O14646 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC25.12■■□□□ 1.61
CHD1O14646 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
CHD1O14646 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
CHD1O14646 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CHD1O14646 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC25.11■■□□□ 1.61
CHD1O14646 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms