Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3B1O00203 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3B1O00203 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
AP3B1O00203 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.22■□□□□ 0.19
AP3B1O00203 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3B1O00203 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3B1O00203 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.22■□□□□ 0.19
AP3B1O00203 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP3B1O00203 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3B1O00203 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3B1O00203 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP3B1O00203 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3B1O00203 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3B1O00203 AC132872.4-202ENST00000622924 2756 ntBASIC16.21■□□□□ 0.19
AP3B1O00203 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.21■□□□□ 0.19
AP3B1O00203 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.21■□□□□ 0.19
AP3B1O00203 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP3B1O00203 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3B1O00203 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
AP3B1O00203 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.21■□□□□ 0.19
AP3B1O00203 AC126177.1-201ENST00000547829 2218 ntBASIC16.21■□□□□ 0.19
AP3B1O00203 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3B1O00203 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3B1O00203 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
AP3B1O00203 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3B1O00203 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.21■□□□□ 0.19
AP3B1O00203 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
AP3B1O00203 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.21■□□□□ 0.19
AP3B1O00203 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.21■□□□□ 0.19
AP3B1O00203 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3B1O00203 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3B1O00203 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP3B1O00203 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3B1O00203 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP3B1O00203 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3B1O00203 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP3B1O00203 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3B1O00203 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP3B1O00203 AC103702.1-201ENST00000548801 2630 ntBASIC16.21■□□□□ 0.19
AP3B1O00203 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3B1O00203 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
AP3B1O00203 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
AP3B1O00203 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.21■□□□□ 0.18
AP3B1O00203 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
AP3B1O00203 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.21■□□□□ 0.18
AP3B1O00203 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
AP3B1O00203 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.21■□□□□ 0.18
AP3B1O00203 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.21■□□□□ 0.18
AP3B1O00203 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3B1O00203 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP3B1O00203 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.2■□□□□ 0.18
AP3B1O00203 AC092384.3-202ENST00000564646 2873 ntBASIC16.2■□□□□ 0.18
AP3B1O00203 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3B1O00203 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.2■□□□□ 0.18
AP3B1O00203 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.2■□□□□ 0.18
AP3B1O00203 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP3B1O00203 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.2■□□□□ 0.18
AP3B1O00203 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP3B1O00203 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3B1O00203 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3B1O00203 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3B1O00203 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.2■□□□□ 0.18
AP3B1O00203 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP3B1O00203 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3B1O00203 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
AP3B1O00203 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.2■□□□□ 0.18
AP3B1O00203 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.2■□□□□ 0.18
AP3B1O00203 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
AP3B1O00203 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.2■□□□□ 0.18
AP3B1O00203 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.2■□□□□ 0.18
AP3B1O00203 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
AP3B1O00203 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.2■□□□□ 0.18
AP3B1O00203 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP3B1O00203 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
AP3B1O00203 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3B1O00203 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3B1O00203 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
AP3B1O00203 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.2■□□□□ 0.18
AP3B1O00203 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.2■□□□□ 0.18
AP3B1O00203 BNIP3P1-202ENST00000550043 1585 ntBASIC16.2■□□□□ 0.18
AP3B1O00203 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.2■□□□□ 0.18
AP3B1O00203 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3B1O00203 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.2■□□□□ 0.18
AP3B1O00203 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3B1O00203 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.2■□□□□ 0.18
AP3B1O00203 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.2■□□□□ 0.18
AP3B1O00203 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
AP3B1O00203 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP3B1O00203 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.19■□□□□ 0.18
AP3B1O00203 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.19■□□□□ 0.18
AP3B1O00203 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.19■□□□□ 0.18
AP3B1O00203 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
AP3B1O00203 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3B1O00203 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.19■□□□□ 0.18
AP3B1O00203 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3B1O00203 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3B1O00203 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
AP3B1O00203 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
AP3B1O00203 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3B1O00203 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms