Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 ADH5P3-201ENST00000433842 1137 ntBASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGA11Q9Y5H2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 AC243562.1-201ENST00000560672 389 ntBASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 AC006058.4-201ENST00000624016 1670 ntBASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 TNRC18P2-201ENST00000417666 2714 ntBASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 AP001282.1-201ENST00000531301 1499 ntBASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA11Q9Y5H2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.58■□□□□ 0.09
PCDHGA11Q9Y5H2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHGA11Q9Y5H2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.58■□□□□ 0.09
PCDHGA11Q9Y5H2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHGA11Q9Y5H2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHGA11Q9Y5H2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
PCDHGA11Q9Y5H2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHGA11Q9Y5H2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 GPX1P2-201ENST00000429271 606 ntBASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms