Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
DNMT3BQ9UBC3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 REXO1L6P-201ENST00000603433 1515 ntBASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 ACTG1P3-201ENST00000431775 1114 ntBASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 KRT43P-201ENST00000434019 910 ntBASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 AL162726.2-201ENST00000438986 1017 ntBASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 BNIP3P42-201ENST00000454982 569 ntBASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 BNIP3P29-201ENST00000598302 571 ntBASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 AC011447.5-201ENST00000616168 564 ntBASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
DNMT3BQ9UBC3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 TOMM22P5-201ENST00000416399 439 ntBASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 MIR5189-201ENST00000577370 114 ntBASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNMT3BQ9UBC3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms