Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC099398.1-201ENST00000567919 2776 ntBASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 RPL7P3-201ENST00000441388 714 ntBASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 BCRP2-202ENST00000447763 634 ntBASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 BCRP6-201ENST00000510112 632 ntBASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 BCRP7-201ENST00000511549 544 ntBASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 KRT8P37-201ENST00000451609 1420 ntBASIC17.77■□□□□ 0.44
PDLIM7Q9NR12 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
PDLIM7Q9NR12 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.77■□□□□ 0.43
PDLIM7Q9NR12 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
PDLIM7Q9NR12 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PDLIM7Q9NR12 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDLIM7Q9NR12 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDLIM7Q9NR12 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDLIM7Q9NR12 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDLIM7Q9NR12 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
PDLIM7Q9NR12 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
PDLIM7Q9NR12 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 AC092506.1-202ENST00000401022 528 ntBASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 MIR1247-201ENST00000408206 136 ntBASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 PFN1P12-201ENST00000455938 534 ntBASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 AC036164.1-201ENST00000570544 333 ntBASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 AC243960.2-201ENST00000600996 747 ntBASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 AC133539.2-201ENST00000604757 467 ntBASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 AC134407.2-201ENST00000625089 1978 ntBASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM7Q9NR12 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms