Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 AC097359.3-201ENST00000603982 1210 ntBASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 AC099568.2-201ENST00000609194 695 ntBASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 AC074338.1-201ENST00000416825 156 ntBASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 USP32P1-208ENST00000506594 1164 ntBASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 AC015910.1-201ENST00000579400 975 ntBASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 RPSAP52-203ENST00000622976 1023 ntBASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.15□□□□□ -0.14
KIAA1549Q9HCM3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 AL008721.1-201ENST00000609964 604 ntBASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 MIR8072-201ENST00000614241 80 ntBASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KIAA1549Q9HCM3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 FO393414.2-201ENST00000405153 598 ntBASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms