Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 AC066615.1-201ENST00000640911 628 ntBASIC15.17■□□□□ 0.02
NR1H4Q96RI1 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 BX640514.1-201ENST00000583223 1918 ntBASIC15.17■□□□□ 0.02
NR1H4Q96RI1 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 AL353593.2-201ENST00000602529 1483 ntBASIC15.16■□□□□ 0.02
NR1H4Q96RI1 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 SLC25A3P1-201ENST00000443844 931 ntBASIC15.16■□□□□ 0.02
NR1H4Q96RI1 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 AC145285.6-201ENST00000604632 637 ntBASIC15.16■□□□□ 0.02
NR1H4Q96RI1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 AD001527.2-201ENST00000622994 785 ntBASIC15.16■□□□□ 0.02
NR1H4Q96RI1 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 AL359881.3-201ENST00000602640 1721 ntBASIC15.16■□□□□ 0.02
NR1H4Q96RI1 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 LINC01230-201ENST00000625222 3017 ntBASIC15.16■□□□□ 0.02
NR1H4Q96RI1 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NR1H4Q96RI1 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 RASA4DP-201ENST00000460726 1199 ntBASIC15.15■□□□□ 0.02
NR1H4Q96RI1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.15■□□□□ 0.02
NR1H4Q96RI1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms