Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NUDCD3Q8IVD9 PMS2P4-201ENST00000412466 1052 ntBASIC16■□□□□ 0.15
NUDCD3Q8IVD9 AC093724.1-201ENST00000448659 1027 ntBASIC16■□□□□ 0.15
NUDCD3Q8IVD9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NUDCD3Q8IVD9 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16■□□□□ 0.15
NUDCD3Q8IVD9 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16■□□□□ 0.15
NUDCD3Q8IVD9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16■□□□□ 0.15
NUDCD3Q8IVD9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16■□□□□ 0.15
NUDCD3Q8IVD9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16■□□□□ 0.15
NUDCD3Q8IVD9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NUDCD3Q8IVD9 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NUDCD3Q8IVD9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16■□□□□ 0.15
NUDCD3Q8IVD9 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NUDCD3Q8IVD9 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16■□□□□ 0.15
NUDCD3Q8IVD9 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16■□□□□ 0.15
NUDCD3Q8IVD9 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NUDCD3Q8IVD9 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NUDCD3Q8IVD9 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NUDCD3Q8IVD9 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16■□□□□ 0.15
NUDCD3Q8IVD9 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16■□□□□ 0.15
NUDCD3Q8IVD9 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 TCAF2P1-201ENST00000291129 2421 ntBASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 HMGA1P7-201ENST00000406908 502 ntBASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 AC245100.5-201ENST00000452108 331 ntBASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 AL365330.1-201ENST00000607459 531 ntBASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 REXO1L6P-202ENST00000619970 1078 ntBASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 AC092127.1-201ENST00000567093 3455 ntBASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NUDCD3Q8IVD9 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 CICP24-201ENST00000605464 2705 ntBASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 MRPL20P1-201ENST00000400819 433 ntBASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 FAM185BP-201ENST00000443595 716 ntBASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 MIR3909-201ENST00000579518 119 ntBASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 OR2I1P-209ENST00000641730 5365 ntBASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
NUDCD3Q8IVD9 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUDCD3Q8IVD9 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms