Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 AL355306.1-201ENST00000415580 579 ntBASIC15.09■□□□□ 0.01
CCDC71Q8IV32 ADH5P3-201ENST00000433842 1137 ntBASIC15.09■□□□□ 0.01
CCDC71Q8IV32 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 SPDYE11-202ENST00000450699 704 ntBASIC15.09■□□□□ 0.01
CCDC71Q8IV32 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 KRT8P48-201ENST00000515599 1220 ntBASIC15.09■□□□□ 0.01
CCDC71Q8IV32 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 SPDYE9P-201ENST00000570642 692 ntBASIC15.09■□□□□ 0.01
CCDC71Q8IV32 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 AC099522.2-201ENST00000607001 744 ntBASIC15.09■□□□□ 0.01
CCDC71Q8IV32 SPDYE10P-202ENST00000612005 668 ntBASIC15.09■□□□□ 0.01
CCDC71Q8IV32 SPDYE8P-202ENST00000612377 668 ntBASIC15.09■□□□□ 0.01
CCDC71Q8IV32 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.08■□□□□ 0.01
CCDC71Q8IV32 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC71Q8IV32 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
CCDC71Q8IV32 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
CCDC71Q8IV32 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC71Q8IV32 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.08■□□□□ 0.01
CCDC71Q8IV32 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC71Q8IV32 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC71Q8IV32 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.08■□□□□ 0.01
CCDC71Q8IV32 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.08■□□□□ 0
CCDC71Q8IV32 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
CCDC71Q8IV32 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC71Q8IV32 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.08■□□□□ 0
CCDC71Q8IV32 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.08■□□□□ 0
CCDC71Q8IV32 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CCDC71Q8IV32 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC71Q8IV32 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC71Q8IV32 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC71Q8IV32 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC71Q8IV32 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.08■□□□□ 0
CCDC71Q8IV32 AL627223.1-201ENST00000416693 442 ntBASIC15.08■□□□□ 0
CCDC71Q8IV32 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.08■□□□□ 0
CCDC71Q8IV32 BCRP1-201ENST00000444246 691 ntBASIC15.08■□□□□ 0
CCDC71Q8IV32 FAM86GP-201ENST00000448322 971 ntBASIC15.08■□□□□ 0
CCDC71Q8IV32 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.08■□□□□ 0
CCDC71Q8IV32 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CCDC71Q8IV32 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.08■□□□□ 0
CCDC71Q8IV32 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
CCDC71Q8IV32 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.08■□□□□ 0
CCDC71Q8IV32 AC107918.2-201ENST00000530817 355 ntBASIC15.08■□□□□ 0
CCDC71Q8IV32 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC71Q8IV32 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.08■□□□□ 0
CCDC71Q8IV32 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CCDC71Q8IV32 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.08■□□□□ 0
CCDC71Q8IV32 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.08■□□□□ 0
CCDC71Q8IV32 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC71Q8IV32 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.08■□□□□ 0
CCDC71Q8IV32 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC71Q8IV32 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.08■□□□□ 0
CCDC71Q8IV32 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC71Q8IV32 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC71Q8IV32 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.08■□□□□ 0
CCDC71Q8IV32 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC71Q8IV32 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.08■□□□□ 0
CCDC71Q8IV32 AC006486.2-201ENST00000624246 2199 ntBASIC15.08■□□□□ 0
CCDC71Q8IV32 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
CCDC71Q8IV32 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC71Q8IV32 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.08■□□□□ 0
CCDC71Q8IV32 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.08■□□□□ 0
CCDC71Q8IV32 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC71Q8IV32 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC71Q8IV32 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.07■□□□□ 0
CCDC71Q8IV32 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.07■□□□□ 0
CCDC71Q8IV32 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CCDC71Q8IV32 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CCDC71Q8IV32 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC71Q8IV32 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC71Q8IV32 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CCDC71Q8IV32 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.07■□□□□ 0
CCDC71Q8IV32 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC71Q8IV32 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.07■□□□□ 0
CCDC71Q8IV32 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.07■□□□□ 0
CCDC71Q8IV32 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms