Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13CQ709C8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13CQ709C8 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.1□□□□□ -0.31
VPS13CQ709C8 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13CQ709C8 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
VPS13CQ709C8 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
VPS13CQ709C8 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
VPS13CQ709C8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.1□□□□□ -0.31
VPS13CQ709C8 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.1□□□□□ -0.31
VPS13CQ709C8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.1□□□□□ -0.31
VPS13CQ709C8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.1□□□□□ -0.31
VPS13CQ709C8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
VPS13CQ709C8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.1□□□□□ -0.31
VPS13CQ709C8 AC148477.4-201ENST00000613430 1793 ntBASIC13.1□□□□□ -0.31
VPS13CQ709C8 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13CQ709C8 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
VPS13CQ709C8 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.1□□□□□ -0.31
VPS13CQ709C8 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.1□□□□□ -0.31
VPS13CQ709C8 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.1□□□□□ -0.31
VPS13CQ709C8 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13CQ709C8 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.1□□□□□ -0.31
VPS13CQ709C8 AC000095.1-201ENST00000603208 874 ntBASIC13.1□□□□□ -0.31
VPS13CQ709C8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
VPS13CQ709C8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.1□□□□□ -0.31
VPS13CQ709C8 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
VPS13CQ709C8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.1□□□□□ -0.31
VPS13CQ709C8 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13CQ709C8 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13CQ709C8 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
VPS13CQ709C8 C2orf27AP3-201ENST00000434123 579 ntBASIC13.09□□□□□ -0.31
VPS13CQ709C8 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
VPS13CQ709C8 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.09□□□□□ -0.31
VPS13CQ709C8 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC13.09□□□□□ -0.31
VPS13CQ709C8 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
VPS13CQ709C8 MIR3907-201ENST00000579424 151 ntBASIC13.09□□□□□ -0.31
VPS13CQ709C8 AC104982.3-201ENST00000581995 514 ntBASIC13.09□□□□□ -0.31
VPS13CQ709C8 AL133499.1-201ENST00000596207 608 ntBASIC13.09□□□□□ -0.31
VPS13CQ709C8 AL354718.3-201ENST00000616414 581 ntBASIC13.09□□□□□ -0.31
VPS13CQ709C8 CR382287.1-201ENST00000623954 586 ntBASIC13.09□□□□□ -0.31
VPS13CQ709C8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13CQ709C8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13CQ709C8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13CQ709C8 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13CQ709C8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
VPS13CQ709C8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13CQ709C8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13CQ709C8 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.09□□□□□ -0.31
VPS13CQ709C8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
VPS13CQ709C8 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.09□□□□□ -0.31
VPS13CQ709C8 AL121723.1-201ENST00000445194 1519 ntBASIC13.09□□□□□ -0.31
VPS13CQ709C8 GGT3P-204ENST00000453783 1664 ntBASIC13.09□□□□□ -0.31
VPS13CQ709C8 RN7SL11P-201ENST00000471305 293 ntBASIC13.09□□□□□ -0.31
VPS13CQ709C8 SERPINA13P-202ENST00000478994 924 ntBASIC13.09□□□□□ -0.31
VPS13CQ709C8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
VPS13CQ709C8 AC120045.2-201ENST00000567334 178 ntBASIC13.09□□□□□ -0.31
VPS13CQ709C8 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13CQ709C8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13CQ709C8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13CQ709C8 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.09□□□□□ -0.31
VPS13CQ709C8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.09□□□□□ -0.31
VPS13CQ709C8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13CQ709C8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13CQ709C8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.09□□□□□ -0.31
VPS13CQ709C8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
VPS13CQ709C8 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.09□□□□□ -0.31
VPS13CQ709C8 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13CQ709C8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.09□□□□□ -0.31
VPS13CQ709C8 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
VPS13CQ709C8 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13CQ709C8 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.09□□□□□ -0.31
VPS13CQ709C8 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
VPS13CQ709C8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13CQ709C8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13CQ709C8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13CQ709C8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13CQ709C8 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
VPS13CQ709C8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.08□□□□□ -0.31
VPS13CQ709C8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
VPS13CQ709C8 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
VPS13CQ709C8 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
VPS13CQ709C8 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
VPS13CQ709C8 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.08□□□□□ -0.31
VPS13CQ709C8 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.08□□□□□ -0.31
VPS13CQ709C8 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.08□□□□□ -0.31
VPS13CQ709C8 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.08□□□□□ -0.31
VPS13CQ709C8 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
VPS13CQ709C8 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
VPS13CQ709C8 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
VPS13CQ709C8 AL645939.5-201ENST00000606834 243 ntBASIC13.08□□□□□ -0.31
VPS13CQ709C8 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
VPS13CQ709C8 AC138649.2-201ENST00000615886 705 ntBASIC13.08□□□□□ -0.31
VPS13CQ709C8 AC006453.4-201ENST00000636949 1252 ntBASIC13.08□□□□□ -0.31
VPS13CQ709C8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.08□□□□□ -0.31
VPS13CQ709C8 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
VPS13CQ709C8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.08□□□□□ -0.32
VPS13CQ709C8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VPS13CQ709C8 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.08□□□□□ -0.32
VPS13CQ709C8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
VPS13CQ709C8 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.08□□□□□ -0.32
VPS13CQ709C8 POM121L10P-201ENST00000436994 1285 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms