Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 AC103702.1-201ENST00000548801 2630 ntBASIC16.63■□□□□ 0.25
LRRC38Q5VT99 AL109954.1-202ENST00000564051 2148 ntBASIC16.63■□□□□ 0.25
LRRC38Q5VT99 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 AL596257.1-201ENST00000641463 2694 ntBASIC16.62■□□□□ 0.25
LRRC38Q5VT99 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 ALG1L5P-201ENST00000482043 771 ntBASIC16.62■□□□□ 0.25
LRRC38Q5VT99 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 AC022145.2-201ENST00000598203 171 ntBASIC16.62■□□□□ 0.25
LRRC38Q5VT99 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC38Q5VT99 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 YBX1P5-201ENST00000509441 847 ntBASIC16.61■□□□□ 0.25
LRRC38Q5VT99 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 AC005829.1-201ENST00000570002 483 ntBASIC16.61■□□□□ 0.25
LRRC38Q5VT99 AL671883.3-201ENST00000603274 991 ntBASIC16.61■□□□□ 0.25
LRRC38Q5VT99 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC38Q5VT99 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms