Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 RNU1-114P-201ENST00000365297 166 ntBASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 BAATP1-201ENST00000412284 1225 ntBASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 KRTAP10-13P-201ENST00000412914 571 ntBASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 NUS1P3-201ENST00000423502 862 ntBASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 PTPA-217ENST00000434095 870 ntTSL 2 BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 MIR4683-201ENST00000579659 81 ntBASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 MIR4313-201ENST00000580760 101 ntBASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 AC073413.1-201ENST00000603927 732 ntBASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13DQ5THJ4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
VPS13DQ5THJ4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
VPS13DQ5THJ4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
VPS13DQ5THJ4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
VPS13DQ5THJ4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
VPS13DQ5THJ4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC10.52□□□□□ -0.72
VPS13DQ5THJ4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
VPS13DQ5THJ4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
VPS13DQ5THJ4 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC10.52□□□□□ -0.72
VPS13DQ5THJ4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
VPS13DQ5THJ4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC10.52□□□□□ -0.72
VPS13DQ5THJ4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
VPS13DQ5THJ4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC10.52□□□□□ -0.72
VPS13DQ5THJ4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC10.52□□□□□ -0.72
VPS13DQ5THJ4 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC10.52□□□□□ -0.72
VPS13DQ5THJ4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
VPS13DQ5THJ4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
VPS13DQ5THJ4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
VPS13DQ5THJ4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
VPS13DQ5THJ4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
VPS13DQ5THJ4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
VPS13DQ5THJ4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
VPS13DQ5THJ4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 AC092364.2-201ENST00000596710 2692 ntBASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 AC011477.6-201ENST00000604980 1927 ntBASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 AL354877.1-201ENST00000424412 413 ntBASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 NUP210P1-202ENST00000504322 710 ntBASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 AL162426.1-201ENST00000624141 743 ntBASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC10.52□□□□□ -0.73
VPS13DQ5THJ4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms