Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 AL035456.1-201ENST00000456064 1369 ntBASIC17.6■□□□□ 0.41
KCNA1Q09470 KRT8P37-201ENST00000451609 1420 ntBASIC17.6■□□□□ 0.41
KCNA1Q09470 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.6■□□□□ 0.41
KCNA1Q09470 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.6■□□□□ 0.41
KCNA1Q09470 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA1Q09470 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.6■□□□□ 0.41
KCNA1Q09470 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
KCNA1Q09470 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA1Q09470 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.6■□□□□ 0.41
KCNA1Q09470 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.6■□□□□ 0.41
KCNA1Q09470 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA1Q09470 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA1Q09470 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.6■□□□□ 0.41
KCNA1Q09470 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA1Q09470 CICP13-201ENST00000422015 2789 ntBASIC17.59■□□□□ 0.41
KCNA1Q09470 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.59■□□□□ 0.41
KCNA1Q09470 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA1Q09470 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
KCNA1Q09470 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.59■□□□□ 0.41
KCNA1Q09470 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
KCNA1Q09470 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.59■□□□□ 0.41
KCNA1Q09470 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
KCNA1Q09470 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.59■□□□□ 0.41
KCNA1Q09470 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.59■□□□□ 0.41
KCNA1Q09470 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA1Q09470 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA1Q09470 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA1Q09470 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA1Q09470 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA1Q09470 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
KCNA1Q09470 SPDYE17-201ENST00000412399 783 ntBASIC17.59■□□□□ 0.41
KCNA1Q09470 AL080243.2-201ENST00000418783 582 ntBASIC17.59■□□□□ 0.41
KCNA1Q09470 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.59■□□□□ 0.41
KCNA1Q09470 AC092580.3-201ENST00000430932 139 ntBASIC17.59■□□□□ 0.41
KCNA1Q09470 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.59■□□□□ 0.41
KCNA1Q09470 EEF1DP4-201ENST00000446006 880 ntBASIC17.59■□□□□ 0.41
KCNA1Q09470 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.59■□□□□ 0.41
KCNA1Q09470 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA1Q09470 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.59■□□□□ 0.41
KCNA1Q09470 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA1Q09470 AL138828.2-201ENST00000615812 383 ntBASIC17.59■□□□□ 0.41
KCNA1Q09470 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.59■□□□□ 0.41
KCNA1Q09470 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA1Q09470 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA1Q09470 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.59■□□□□ 0.41
KCNA1Q09470 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
KCNA1Q09470 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA1Q09470 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
KCNA1Q09470 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA1Q09470 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
KCNA1Q09470 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
KCNA1Q09470 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA1Q09470 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KCNA1Q09470 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.58■□□□□ 0.41
KCNA1Q09470 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
KCNA1Q09470 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KCNA1Q09470 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.58■□□□□ 0.4
KCNA1Q09470 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA1Q09470 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA1Q09470 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA1Q09470 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA1Q09470 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA1Q09470 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA1Q09470 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA1Q09470 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.58■□□□□ 0.4
KCNA1Q09470 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA1Q09470 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA1Q09470 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.58■□□□□ 0.4
KCNA1Q09470 AZGP1P1-201ENST00000411909 902 ntBASIC17.58■□□□□ 0.4
KCNA1Q09470 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.58■□□□□ 0.4
KCNA1Q09470 PMS2P2-201ENST00000425039 1128 ntBASIC17.58■□□□□ 0.4
KCNA1Q09470 AL645939.2-201ENST00000427340 991 ntBASIC17.58■□□□□ 0.4
KCNA1Q09470 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.58■□□□□ 0.4
KCNA1Q09470 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.58■□□□□ 0.4
KCNA1Q09470 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.58■□□□□ 0.4
KCNA1Q09470 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.58■□□□□ 0.4
KCNA1Q09470 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.58■□□□□ 0.4
KCNA1Q09470 AL589739.1-201ENST00000607720 493 ntBASIC17.58■□□□□ 0.4
KCNA1Q09470 AC106028.4-201ENST00000614509 607 ntBASIC17.58■□□□□ 0.4
KCNA1Q09470 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA1Q09470 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA1Q09470 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA1Q09470 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA1Q09470 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
KCNA1Q09470 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
KCNA1Q09470 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
KCNA1Q09470 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA1Q09470 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA1Q09470 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.58■□□□□ 0.4
KCNA1Q09470 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
KCNA1Q09470 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA1Q09470 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
KCNA1Q09470 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNA1Q09470 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNA1Q09470 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
KCNA1Q09470 FO538757.1-201ENST00000623083 1397 ntBASIC17.57■□□□□ 0.4
KCNA1Q09470 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNA1Q09470 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
KCNA1Q09470 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNA1Q09470 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms