Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LTBQ06643 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LTBQ06643 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
LTBQ06643 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.68□□□□□ -0.06
LTBQ06643 HLA-V-201ENST00000429037 534 ntBASIC14.68□□□□□ -0.06
LTBQ06643 AL671277.1-201ENST00000429656 993 ntBASIC14.68□□□□□ -0.06
LTBQ06643 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LTBQ06643 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.68□□□□□ -0.06
LTBQ06643 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.68□□□□□ -0.06
LTBQ06643 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LTBQ06643 AC005225.4-201ENST00000557330 545 ntBASIC14.68□□□□□ -0.06
LTBQ06643 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.68□□□□□ -0.06
LTBQ06643 AC025678.2-201ENST00000562061 970 ntBASIC14.68□□□□□ -0.06
LTBQ06643 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.68□□□□□ -0.06
LTBQ06643 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.68□□□□□ -0.06
LTBQ06643 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LTBQ06643 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.68□□□□□ -0.06
LTBQ06643 AL008721.1-201ENST00000609964 604 ntBASIC14.68□□□□□ -0.06
LTBQ06643 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.68□□□□□ -0.06
LTBQ06643 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LTBQ06643 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
LTBQ06643 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
LTBQ06643 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LTBQ06643 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LTBQ06643 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.68□□□□□ -0.06
LTBQ06643 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.68□□□□□ -0.06
LTBQ06643 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LTBQ06643 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LTBQ06643 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LTBQ06643 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LTBQ06643 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LTBQ06643 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LTBQ06643 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.68□□□□□ -0.06
LTBQ06643 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.68□□□□□ -0.06
LTBQ06643 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.68□□□□□ -0.06
LTBQ06643 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.68□□□□□ -0.06
LTBQ06643 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.68□□□□□ -0.06
LTBQ06643 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.67□□□□□ -0.06
LTBQ06643 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.67□□□□□ -0.06
LTBQ06643 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.67□□□□□ -0.06
LTBQ06643 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
LTBQ06643 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.67□□□□□ -0.06
LTBQ06643 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.67□□□□□ -0.06
LTBQ06643 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LTBQ06643 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LTBQ06643 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
LTBQ06643 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.67□□□□□ -0.06
LTBQ06643 AP005117.1-202ENST00000581724 1908 ntBASIC14.67□□□□□ -0.06
LTBQ06643 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.67□□□□□ -0.06
LTBQ06643 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.67□□□□□ -0.06
LTBQ06643 TFAMP1-201ENST00000412727 736 ntBASIC14.67□□□□□ -0.06
LTBQ06643 AL355306.1-201ENST00000415580 579 ntBASIC14.67□□□□□ -0.06
LTBQ06643 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.67□□□□□ -0.06
LTBQ06643 FAM58CP-201ENST00000435741 640 ntBASIC14.67□□□□□ -0.06
LTBQ06643 RNA5SP421-201ENST00000516864 134 ntBASIC14.67□□□□□ -0.06
LTBQ06643 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.67□□□□□ -0.06
LTBQ06643 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LTBQ06643 AC073389.1-201ENST00000595595 795 ntBASIC14.67□□□□□ -0.06
LTBQ06643 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 AJ011932.1-201ENST00000621707 465 ntBASIC14.67□□□□□ -0.06
LTBQ06643 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.67□□□□□ -0.06
LTBQ06643 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
LTBQ06643 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.67□□□□□ -0.06
LTBQ06643 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.67□□□□□ -0.06
LTBQ06643 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LTBQ06643 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LTBQ06643 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBQ06643 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.66□□□□□ -0.06
LTBQ06643 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.66□□□□□ -0.06
LTBQ06643 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
LTBQ06643 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.66□□□□□ -0.06
LTBQ06643 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LTBQ06643 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.66□□□□□ -0.06
LTBQ06643 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LTBQ06643 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms