Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST1H3AP68431 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
HIST1H3AP68431 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST1H3AP68431 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST1H3AP68431 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
HIST1H3AP68431 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST1H3AP68431 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
HIST1H3AP68431 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST1H3AP68431 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.02□□□□□ -0.16
HIST1H3AP68431 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST1H3AP68431 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
HIST1H3AP68431 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.02□□□□□ -0.16
HIST1H3AP68431 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.02□□□□□ -0.16
HIST1H3AP68431 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST1H3AP68431 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.02□□□□□ -0.16
HIST1H3AP68431 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HIST1H3AP68431 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
HIST1H3AP68431 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST1H3AP68431 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HIST1H3AP68431 CYP4F24P-201ENST00000586049 1580 ntBASIC14.02□□□□□ -0.16
HIST1H3AP68431 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HIST1H3AP68431 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.02□□□□□ -0.16
HIST1H3AP68431 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HIST1H3AP68431 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST1H3AP68431 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST1H3AP68431 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST1H3AP68431 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST1H3AP68431 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
HIST1H3AP68431 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.02□□□□□ -0.17
HIST1H3AP68431 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.02□□□□□ -0.17
HIST1H3AP68431 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.02□□□□□ -0.17
HIST1H3AP68431 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.02□□□□□ -0.17
HIST1H3AP68431 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.02□□□□□ -0.17
HIST1H3AP68431 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST1H3AP68431 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
HIST1H3AP68431 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
HIST1H3AP68431 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HIST1H3AP68431 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.02□□□□□ -0.17
HIST1H3AP68431 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.02□□□□□ -0.17
HIST1H3AP68431 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
HIST1H3AP68431 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
HIST1H3AP68431 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.02□□□□□ -0.17
HIST1H3AP68431 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST1H3AP68431 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.02□□□□□ -0.17
HIST1H3AP68431 REXO1L1P-202ENST00000608646 1974 ntBASIC14.02□□□□□ -0.17
HIST1H3AP68431 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.02□□□□□ -0.17
HIST1H3AP68431 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H3AP68431 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H3AP68431 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H3AP68431 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H3AP68431 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H3AP68431 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 GPS2P2-201ENST00000430745 888 ntBASIC14.01□□□□□ -0.17
HIST1H3AP68431 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H3AP68431 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H3AP68431 AC010327.4-202ENST00000591484 748 ntBASIC14.01□□□□□ -0.17
HIST1H3AP68431 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H3AP68431 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H3AP68431 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H3AP68431 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H3AP68431 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H3AP68431 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H3AP68431 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H3AP68431 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H3AP68431 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H3AP68431 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H3AP68431 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H3AP68431 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.01□□□□□ -0.17
HIST1H3AP68431 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14□□□□□ -0.17
HIST1H3AP68431 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms