Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.54■□□□□ 0.4
CLCN3P51790 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN3P51790 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.53■□□□□ 0.4
CLCN3P51790 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN3P51790 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN3P51790 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN3P51790 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.53■□□□□ 0.4
CLCN3P51790 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CLCN3P51790 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CLCN3P51790 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN3P51790 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN3P51790 CDC14C-201ENST00000428251 1719 ntBASIC17.53■□□□□ 0.4
CLCN3P51790 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN3P51790 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN3P51790 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.53■□□□□ 0.4
CLCN3P51790 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN3P51790 CLK3P2-201ENST00000427566 1453 ntBASIC17.53■□□□□ 0.4
CLCN3P51790 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN3P51790 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CLCN3P51790 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN3P51790 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CLCN3P51790 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.53■□□□□ 0.4
CLCN3P51790 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CLCN3P51790 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.53■□□□□ 0.4
CLCN3P51790 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.53■□□□□ 0.4
CLCN3P51790 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN3P51790 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN3P51790 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.53■□□□□ 0.4
CLCN3P51790 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.53■□□□□ 0.4
CLCN3P51790 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.53■□□□□ 0.4
CLCN3P51790 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.53■□□□□ 0.4
CLCN3P51790 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CLCN3P51790 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLCN3P51790 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.53■□□□□ 0.4
CLCN3P51790 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CLCN3P51790 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.53■□□□□ 0.4
CLCN3P51790 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN3P51790 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CLCN3P51790 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CLCN3P51790 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CLCN3P51790 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.53■□□□□ 0.4
CLCN3P51790 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CLCN3P51790 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN3P51790 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.52■□□□□ 0.4
CLCN3P51790 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.52■□□□□ 0.4
CLCN3P51790 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.52■□□□□ 0.4
CLCN3P51790 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN3P51790 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.52■□□□□ 0.4
CLCN3P51790 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN3P51790 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
CLCN3P51790 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
CLCN3P51790 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN3P51790 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CLCN3P51790 AL512384.1-201ENST00000406683 331 ntBASIC17.52■□□□□ 0.4
CLCN3P51790 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.52■□□□□ 0.4
CLCN3P51790 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.52■□□□□ 0.4
CLCN3P51790 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.52■□□□□ 0.4
CLCN3P51790 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN3P51790 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.52■□□□□ 0.4
CLCN3P51790 RRP7BP-205ENST00000566851 833 ntBASIC17.52■□□□□ 0.4
CLCN3P51790 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.52■□□□□ 0.4
CLCN3P51790 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.52■□□□□ 0.4
CLCN3P51790 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN3P51790 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN3P51790 AC020916.1-201ENST00000587762 1774 ntBASIC17.52■□□□□ 0.4
CLCN3P51790 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.52■□□□□ 0.4
CLCN3P51790 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN3P51790 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CLCN3P51790 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.52■□□□□ 0.39
CLCN3P51790 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CLCN3P51790 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CLCN3P51790 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CLCN3P51790 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLCN3P51790 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CLCN3P51790 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN3P51790 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN3P51790 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.51■□□□□ 0.39
CLCN3P51790 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.51■□□□□ 0.39
CLCN3P51790 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN3P51790 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.51■□□□□ 0.39
CLCN3P51790 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN3P51790 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN3P51790 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN3P51790 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN3P51790 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.51■□□□□ 0.39
CLCN3P51790 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN3P51790 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN3P51790 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.51■□□□□ 0.39
CLCN3P51790 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.51■□□□□ 0.39
CLCN3P51790 AC136604.1-201ENST00000418535 575 ntBASIC17.51■□□□□ 0.39
CLCN3P51790 U91328.1-201ENST00000437528 223 ntBASIC17.51■□□□□ 0.39
CLCN3P51790 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.51■□□□□ 0.39
CLCN3P51790 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.51■□□□□ 0.39
CLCN3P51790 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.51■□□□□ 0.39
CLCN3P51790 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.51■□□□□ 0.39
CLCN3P51790 GIMAP3P-201ENST00000495150 836 ntBASIC17.51■□□□□ 0.39
CLCN3P51790 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
CLCN3P51790 AC097359.3-201ENST00000603982 1210 ntBASIC17.51■□□□□ 0.39
CLCN3P51790 WFDC1-204ENST00000613603 549 ntBASIC17.51■□□□□ 0.39
CLCN3P51790 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms