Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR3AP46098 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HTR3AP46098 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HTR3AP46098 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HTR3AP46098 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR3AP46098 YBX2P1-201ENST00000394192 760 ntBASIC14.88□□□□□ -0.03
HTR3AP46098 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HTR3AP46098 AL355306.1-201ENST00000415580 579 ntBASIC14.88□□□□□ -0.03
HTR3AP46098 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HTR3AP46098 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR3AP46098 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.88□□□□□ -0.03
HTR3AP46098 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.88□□□□□ -0.03
HTR3AP46098 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.88□□□□□ -0.03
HTR3AP46098 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.88□□□□□ -0.03
HTR3AP46098 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
HTR3AP46098 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.88□□□□□ -0.03
HTR3AP46098 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HTR3AP46098 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HTR3AP46098 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
HTR3AP46098 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR3AP46098 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HTR3AP46098 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR3AP46098 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR3AP46098 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR3AP46098 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HTR3AP46098 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR3AP46098 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.88□□□□□ -0.03
HTR3AP46098 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR3AP46098 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HTR3AP46098 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
HTR3AP46098 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR3AP46098 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR3AP46098 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.87□□□□□ -0.03
HTR3AP46098 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HTR3AP46098 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR3AP46098 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HTR3AP46098 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.87□□□□□ -0.03
HTR3AP46098 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HTR3AP46098 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HTR3AP46098 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR3AP46098 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HTR3AP46098 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.87□□□□□ -0.03
HTR3AP46098 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.87□□□□□ -0.03
HTR3AP46098 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR3AP46098 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR3AP46098 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.87□□□□□ -0.03
HTR3AP46098 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.87□□□□□ -0.03
HTR3AP46098 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.87□□□□□ -0.03
HTR3AP46098 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.87□□□□□ -0.03
HTR3AP46098 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.87□□□□□ -0.03
HTR3AP46098 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.87□□□□□ -0.03
HTR3AP46098 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HTR3AP46098 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HTR3AP46098 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.87□□□□□ -0.03
HTR3AP46098 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
HTR3AP46098 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR3AP46098 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.87□□□□□ -0.03
HTR3AP46098 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.87□□□□□ -0.03
HTR3AP46098 AL596087.1-201ENST00000400979 1969 ntBASIC14.87□□□□□ -0.03
HTR3AP46098 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HTR3AP46098 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.87□□□□□ -0.03
HTR3AP46098 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
HTR3AP46098 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR3AP46098 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR3AP46098 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HTR3AP46098 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR3AP46098 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HTR3AP46098 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HTR3AP46098 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HTR3AP46098 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.86□□□□□ -0.03
HTR3AP46098 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HTR3AP46098 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR3AP46098 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR3AP46098 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR3AP46098 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HTR3AP46098 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR3AP46098 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR3AP46098 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HTR3AP46098 AC023908.3-201ENST00000564211 3047 ntBASIC14.86□□□□□ -0.03
HTR3AP46098 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR3AP46098 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HTR3AP46098 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HTR3AP46098 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HTR3AP46098 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR3AP46098 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR3AP46098 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HTR3AP46098 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR3AP46098 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.86□□□□□ -0.03
HTR3AP46098 TFAMP1-201ENST00000412727 736 ntBASIC14.86□□□□□ -0.03
HTR3AP46098 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HTR3AP46098 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.86□□□□□ -0.03
HTR3AP46098 AC105233.2-201ENST00000523697 349 ntBASIC14.86□□□□□ -0.03
HTR3AP46098 AF228730.5-201ENST00000530288 346 ntBASIC14.86□□□□□ -0.03
HTR3AP46098 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.86□□□□□ -0.03
HTR3AP46098 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.86□□□□□ -0.03
HTR3AP46098 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.86□□□□□ -0.03
HTR3AP46098 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
HTR3AP46098 AC092902.6-201ENST00000641783 218 ntBASIC14.86□□□□□ -0.03
HTR3AP46098 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
HTR3AP46098 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms