Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MBD4O95243 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.05■□□□□ 0.64
MBD4O95243 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
MBD4O95243 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
MBD4O95243 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
MBD4O95243 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
MBD4O95243 PIN1P1-201ENST00000412108 996 ntBASIC19.05■□□□□ 0.64
MBD4O95243 CRB3P1-201ENST00000449338 276 ntBASIC19.05■□□□□ 0.64
MBD4O95243 COX20P2-201ENST00000452636 358 ntBASIC19.05■□□□□ 0.64
MBD4O95243 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.05■□□□□ 0.64
MBD4O95243 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
MBD4O95243 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.05■□□□□ 0.64
MBD4O95243 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.05■□□□□ 0.64
MBD4O95243 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
MBD4O95243 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.05■□□□□ 0.64
MBD4O95243 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
MBD4O95243 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.05■□□□□ 0.64
MBD4O95243 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.05■□□□□ 0.64
MBD4O95243 AC092337.1-201ENST00000568699 1129 ntBASIC19.05■□□□□ 0.64
MBD4O95243 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.05■□□□□ 0.64
MBD4O95243 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.05■□□□□ 0.64
MBD4O95243 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.05■□□□□ 0.64
MBD4O95243 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.05■□□□□ 0.64
MBD4O95243 AC097359.3-201ENST00000603982 1210 ntBASIC19.05■□□□□ 0.64
MBD4O95243 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
MBD4O95243 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
MBD4O95243 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD4O95243 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
MBD4O95243 AC112504.1-201ENST00000623415 1841 ntBASIC19.04■□□□□ 0.64
MBD4O95243 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD4O95243 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.04■□□□□ 0.64
MBD4O95243 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.04■□□□□ 0.64
MBD4O95243 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD4O95243 AC007541.1-201ENST00000570282 1469 ntBASIC19.04■□□□□ 0.64
MBD4O95243 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.04■□□□□ 0.64
MBD4O95243 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD4O95243 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MBD4O95243 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD4O95243 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD4O95243 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.04■□□□□ 0.64
MBD4O95243 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
MBD4O95243 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD4O95243 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MBD4O95243 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD4O95243 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.04■□□□□ 0.64
MBD4O95243 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
MBD4O95243 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
MBD4O95243 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.04■□□□□ 0.64
MBD4O95243 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MBD4O95243 AC136604.1-201ENST00000418535 575 ntBASIC19.04■□□□□ 0.64
MBD4O95243 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD4O95243 RPL13P2-201ENST00000440687 659 ntBASIC19.04■□□□□ 0.64
MBD4O95243 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD4O95243 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.04■□□□□ 0.64
MBD4O95243 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.04■□□□□ 0.64
MBD4O95243 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.04■□□□□ 0.64
MBD4O95243 AF228730.6-201ENST00000641497 218 ntBASIC19.04■□□□□ 0.64
MBD4O95243 AC084121.3-201ENST00000641716 218 ntBASIC19.04■□□□□ 0.64
MBD4O95243 AL391005.1-201ENST00000623953 2435 ntBASIC19.04■□□□□ 0.64
MBD4O95243 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD4O95243 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.04■□□□□ 0.64
MBD4O95243 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
MBD4O95243 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD4O95243 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD4O95243 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MBD4O95243 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.03■□□□□ 0.64
MBD4O95243 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
MBD4O95243 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
MBD4O95243 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MBD4O95243 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.03■□□□□ 0.64
MBD4O95243 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MBD4O95243 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MBD4O95243 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.03■□□□□ 0.64
MBD4O95243 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MBD4O95243 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MBD4O95243 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
MBD4O95243 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms