Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-2O95096 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-2O95096 AZGP1P1-201ENST00000411909 902 ntBASIC14.77□□□□□ -0.05
NKX2-2O95096 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
NKX2-2O95096 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.77□□□□□ -0.05
NKX2-2O95096 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.77□□□□□ -0.05
NKX2-2O95096 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-2O95096 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.77□□□□□ -0.05
NKX2-2O95096 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
NKX2-2O95096 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.77□□□□□ -0.05
NKX2-2O95096 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
NKX2-2O95096 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-2O95096 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-2O95096 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
NKX2-2O95096 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
NKX2-2O95096 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-2O95096 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-2O95096 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
NKX2-2O95096 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-2O95096 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-2O95096 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
NKX2-2O95096 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-2O95096 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.77□□□□□ -0.05
NKX2-2O95096 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-2O95096 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
NKX2-2O95096 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
NKX2-2O95096 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.76□□□□□ -0.05
NKX2-2O95096 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
NKX2-2O95096 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
NKX2-2O95096 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.76□□□□□ -0.05
NKX2-2O95096 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
NKX2-2O95096 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.76□□□□□ -0.05
NKX2-2O95096 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
NKX2-2O95096 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.76□□□□□ -0.05
NKX2-2O95096 HIST3H2BA-201ENST00000436555 524 ntBASIC14.76□□□□□ -0.05
NKX2-2O95096 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.76□□□□□ -0.05
NKX2-2O95096 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.76□□□□□ -0.05
NKX2-2O95096 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NKX2-2O95096 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.76□□□□□ -0.05
NKX2-2O95096 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NKX2-2O95096 HNRNPUP1-201ENST00000554987 333 ntBASIC14.76□□□□□ -0.05
NKX2-2O95096 AL079307.3-201ENST00000556114 283 ntBASIC14.76□□□□□ -0.05
NKX2-2O95096 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.76□□□□□ -0.05
NKX2-2O95096 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.76□□□□□ -0.05
NKX2-2O95096 AC097359.3-201ENST00000603982 1210 ntBASIC14.76□□□□□ -0.05
NKX2-2O95096 AC139530.3-201ENST00000620344 690 ntBASIC14.76□□□□□ -0.05
NKX2-2O95096 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
NKX2-2O95096 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.76□□□□□ -0.05
NKX2-2O95096 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.76□□□□□ -0.05
NKX2-2O95096 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.76□□□□□ -0.05
NKX2-2O95096 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.76□□□□□ -0.05
NKX2-2O95096 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
NKX2-2O95096 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.76□□□□□ -0.05
NKX2-2O95096 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-2O95096 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-2O95096 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX2-2O95096 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
NKX2-2O95096 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-2O95096 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-2O95096 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-2O95096 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
NKX2-2O95096 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX2-2O95096 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.75□□□□□ -0.05
NKX2-2O95096 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-2O95096 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-2O95096 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX2-2O95096 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-2O95096 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-2O95096 AC136604.1-201ENST00000418535 575 ntBASIC14.75□□□□□ -0.05
NKX2-2O95096 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX2-2O95096 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.75□□□□□ -0.05
NKX2-2O95096 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.75□□□□□ -0.05
NKX2-2O95096 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX2-2O95096 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX2-2O95096 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX2-2O95096 AC025678.2-201ENST00000562061 970 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms