Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC074338.1-201ENST00000416825 156 ntBASIC14.38□□□□□ -0.11
ZIC3O60481 AC136604.1-201ENST00000418535 575 ntBASIC14.38□□□□□ -0.11
ZIC3O60481 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.38□□□□□ -0.11
ZIC3O60481 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.38□□□□□ -0.11
ZIC3O60481 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.38□□□□□ -0.11
ZIC3O60481 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.38□□□□□ -0.11
ZIC3O60481 SPDYE18-201ENST00000510091 1050 ntBASIC14.38□□□□□ -0.11
ZIC3O60481 HNRNPUP1-201ENST00000554987 333 ntBASIC14.38□□□□□ -0.11
ZIC3O60481 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
ZIC3O60481 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.38□□□□□ -0.11
ZIC3O60481 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
ZIC3O60481 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.38□□□□□ -0.11
ZIC3O60481 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
ZIC3O60481 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 AC018695.7-201ENST00000624587 2492 ntBASIC14.38□□□□□ -0.11
ZIC3O60481 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ZIC3O60481 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.38□□□□□ -0.11
ZIC3O60481 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
ZIC3O60481 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
ZIC3O60481 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ZIC3O60481 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.38□□□□□ -0.11
ZIC3O60481 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.38□□□□□ -0.11
ZIC3O60481 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ZIC3O60481 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ZIC3O60481 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ZIC3O60481 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.37□□□□□ -0.11
ZIC3O60481 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 PCDHA1-201ENST00000378133 2726 ntBASIC14.37□□□□□ -0.11
ZIC3O60481 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ZIC3O60481 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ZIC3O60481 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ZIC3O60481 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.37□□□□□ -0.11
ZIC3O60481 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.37□□□□□ -0.11
ZIC3O60481 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.37□□□□□ -0.11
ZIC3O60481 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.37□□□□□ -0.11
ZIC3O60481 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.37□□□□□ -0.11
ZIC3O60481 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.37□□□□□ -0.11
ZIC3O60481 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 SRD5A3P1-201ENST00000603021 949 ntBASIC14.37□□□□□ -0.11
ZIC3O60481 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.37□□□□□ -0.11
ZIC3O60481 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.37□□□□□ -0.11
ZIC3O60481 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ZIC3O60481 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ZIC3O60481 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.37□□□□□ -0.11
ZIC3O60481 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZIC3O60481 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
ZIC3O60481 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.36□□□□□ -0.11
ZIC3O60481 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZIC3O60481 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.36□□□□□ -0.11
ZIC3O60481 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
ZIC3O60481 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZIC3O60481 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZIC3O60481 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZIC3O60481 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
ZIC3O60481 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZIC3O60481 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ZIC3O60481 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZIC3O60481 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZIC3O60481 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.36□□□□□ -0.11
ZIC3O60481 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ZIC3O60481 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.36□□□□□ -0.11
ZIC3O60481 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZIC3O60481 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZIC3O60481 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms