Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LCMT2O60294 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
LCMT2O60294 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
LCMT2O60294 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCMT2O60294 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LCMT2O60294 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
LCMT2O60294 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.34■□□□□ 0.05
LCMT2O60294 TREML5P-201ENST00000421694 576 ntBASIC15.34■□□□□ 0.05
LCMT2O60294 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LCMT2O60294 AC069120.2-201ENST00000524091 540 ntBASIC15.34■□□□□ 0.05
LCMT2O60294 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.34■□□□□ 0.05
LCMT2O60294 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.34■□□□□ 0.05
LCMT2O60294 AL138828.2-201ENST00000615812 383 ntBASIC15.34■□□□□ 0.05
LCMT2O60294 AC093512.1-201ENST00000617969 520 ntBASIC15.34■□□□□ 0.05
LCMT2O60294 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
LCMT2O60294 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.34■□□□□ 0.05
LCMT2O60294 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCMT2O60294 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.34■□□□□ 0.05
LCMT2O60294 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.34■□□□□ 0.05
LCMT2O60294 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.34■□□□□ 0.05
LCMT2O60294 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.34■□□□□ 0.05
LCMT2O60294 REXO1L1P-202ENST00000608646 1974 ntBASIC15.34■□□□□ 0.05
LCMT2O60294 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCMT2O60294 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LCMT2O60294 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCMT2O60294 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
LCMT2O60294 FO538757.1-201ENST00000623083 1397 ntBASIC15.34■□□□□ 0.05
LCMT2O60294 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LCMT2O60294 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
LCMT2O60294 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCMT2O60294 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCMT2O60294 CETN4P-206ENST00000642099 2168 ntBASIC15.34■□□□□ 0.05
LCMT2O60294 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LCMT2O60294 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LCMT2O60294 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.33■□□□□ 0.05
LCMT2O60294 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
LCMT2O60294 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.33■□□□□ 0.04
LCMT2O60294 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCMT2O60294 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LCMT2O60294 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCMT2O60294 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCMT2O60294 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.33■□□□□ 0.04
LCMT2O60294 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LCMT2O60294 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.33■□□□□ 0.04
LCMT2O60294 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LCMT2O60294 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCMT2O60294 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCMT2O60294 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.33■□□□□ 0.04
LCMT2O60294 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LCMT2O60294 MIR943-201ENST00000401286 94 ntBASIC15.33■□□□□ 0.04
LCMT2O60294 AC092580.3-201ENST00000430932 139 ntBASIC15.33■□□□□ 0.04
LCMT2O60294 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.33■□□□□ 0.04
LCMT2O60294 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCMT2O60294 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LCMT2O60294 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.33■□□□□ 0.04
LCMT2O60294 RFPL4AP1-201ENST00000530883 850 ntBASIC15.33■□□□□ 0.04
LCMT2O60294 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.33■□□□□ 0.04
LCMT2O60294 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCMT2O60294 SPDYE12P-201ENST00000618416 771 ntBASIC15.33■□□□□ 0.04
LCMT2O60294 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.33■□□□□ 0.04
LCMT2O60294 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCMT2O60294 KRT8P12-202ENST00000472924 1397 ntBASIC15.33■□□□□ 0.04
LCMT2O60294 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LCMT2O60294 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LCMT2O60294 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCMT2O60294 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LCMT2O60294 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.33■□□□□ 0.04
LCMT2O60294 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.33■□□□□ 0.04
LCMT2O60294 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LCMT2O60294 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.33■□□□□ 0.04
LCMT2O60294 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.33■□□□□ 0.04
LCMT2O60294 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LCMT2O60294 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCMT2O60294 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCMT2O60294 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.32■□□□□ 0.04
LCMT2O60294 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.32■□□□□ 0.04
LCMT2O60294 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
LCMT2O60294 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCMT2O60294 CICP6-201ENST00000457191 2729 ntBASIC15.32■□□□□ 0.04
LCMT2O60294 AC132872.4-202ENST00000622924 2756 ntBASIC15.32■□□□□ 0.04
LCMT2O60294 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.32■□□□□ 0.04
LCMT2O60294 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.32■□□□□ 0.04
LCMT2O60294 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCMT2O60294 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LCMT2O60294 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LCMT2O60294 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LCMT2O60294 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.32■□□□□ 0.04
LCMT2O60294 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCMT2O60294 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LCMT2O60294 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.32■□□□□ 0.04
LCMT2O60294 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.32■□□□□ 0.04
LCMT2O60294 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCMT2O60294 HIST3H2BA-201ENST00000436555 524 ntBASIC15.32■□□□□ 0.04
LCMT2O60294 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
LCMT2O60294 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.32■□□□□ 0.04
LCMT2O60294 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LCMT2O60294 AC027369.6-201ENST00000525520 931 ntBASIC15.32■□□□□ 0.04
LCMT2O60294 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.32■□□□□ 0.04
LCMT2O60294 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.32■□□□□ 0.04
LCMT2O60294 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms