Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHD2O14647 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.75■■□□□ 1.07
CHD2O14647 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CHD2O14647 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHD2O14647 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC21.75■■□□□ 1.07
CHD2O14647 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHD2O14647 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD2O14647 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD2O14647 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
CHD2O14647 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHD2O14647 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC21.74■■□□□ 1.07
CHD2O14647 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD2O14647 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD2O14647 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD2O14647 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD2O14647 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHD2O14647 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC21.74■■□□□ 1.07
CHD2O14647 AC104784.1-201ENST00000473096 294 ntBASIC21.74■■□□□ 1.07
CHD2O14647 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC21.74■■□□□ 1.07
CHD2O14647 MIR4783-201ENST00000580343 82 ntBASIC21.74■■□□□ 1.07
CHD2O14647 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD2O14647 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHD2O14647 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC21.74■■□□□ 1.07
CHD2O14647 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC21.74■■□□□ 1.07
CHD2O14647 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CHD2O14647 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC21.73■■□□□ 1.07
CHD2O14647 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHD2O14647 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHD2O14647 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.73■■□□□ 1.07
CHD2O14647 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC21.73■■□□□ 1.07
CHD2O14647 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHD2O14647 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CHD2O14647 ATP6V0CP2-201ENST00000469409 207 ntBASIC21.73■■□□□ 1.07
CHD2O14647 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC21.73■■□□□ 1.07
CHD2O14647 AC116345.2-201ENST00000512837 523 ntBASIC21.73■■□□□ 1.07
CHD2O14647 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC21.73■■□□□ 1.07
CHD2O14647 AC103988.2-201ENST00000561804 725 ntBASIC21.73■■□□□ 1.07
CHD2O14647 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CHD2O14647 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHD2O14647 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CHD2O14647 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC21.73■■□□□ 1.07
CHD2O14647 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CHD2O14647 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHD2O14647 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
CHD2O14647 OARD1-204ENST00000464633 717 ntTSL 2 BASIC21.73■■□□□ 1.07
CHD2O14647 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
CHD2O14647 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHD2O14647 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC21.73■■□□□ 1.07
CHD2O14647 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC21.73■■□□□ 1.07
CHD2O14647 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC21.73■■□□□ 1.07
CHD2O14647 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC21.73■■□□□ 1.07
CHD2O14647 YRDCP1-201ENST00000621419 643 ntBASIC21.73■■□□□ 1.07
CHD2O14647 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC21.73■■□□□ 1.07
CHD2O14647 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHD2O14647 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHD2O14647 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CHD2O14647 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC21.72■■□□□ 1.07
CHD2O14647 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.72■■□□□ 1.07
CHD2O14647 LRRC59-203ENST00000576448 1531 ntBASIC21.72■■□□□ 1.07
CHD2O14647 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHD2O14647 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
CHD2O14647 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.72■■□□□ 1.07
CHD2O14647 AC006480.2-201ENST00000609770 1337 ntBASIC21.72■■□□□ 1.07
CHD2O14647 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC21.72■■□□□ 1.07
CHD2O14647 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CHD2O14647 AL139094.1-201ENST00000405549 1188 ntBASIC21.72■■□□□ 1.07
CHD2O14647 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHD2O14647 AL008707.1-201ENST00000422498 534 ntBASIC21.72■■□□□ 1.07
CHD2O14647 AC114812.1-204ENST00000449669 728 ntBASIC21.72■■□□□ 1.07
CHD2O14647 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC21.72■■□□□ 1.07
CHD2O14647 MARK2P5-201ENST00000507649 634 ntBASIC21.72■■□□□ 1.07
CHD2O14647 EHF-205ENST00000527935 557 ntTSL 2 BASIC21.72■■□□□ 1.07
CHD2O14647 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC21.72■■□□□ 1.07
CHD2O14647 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CHD2O14647 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHD2O14647 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC21.72■■□□□ 1.07
CHD2O14647 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
CHD2O14647 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CHD2O14647 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHD2O14647 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHD2O14647 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
CHD2O14647 AL645608.8-201ENST00000606034 2086 ntBASIC21.72■■□□□ 1.07
CHD2O14647 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CHD2O14647 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC21.72■■□□□ 1.07
CHD2O14647 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHD2O14647 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC21.71■■□□□ 1.07
CHD2O14647 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHD2O14647 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHD2O14647 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHD2O14647 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHD2O14647 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC21.71■■□□□ 1.07
CHD2O14647 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHD2O14647 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC21.71■■□□□ 1.07
CHD2O14647 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC21.71■■□□□ 1.07
CHD2O14647 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHD2O14647 AC018892.3-201ENST00000623986 2499 ntBASIC21.71■■□□□ 1.07
CHD2O14647 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CHD2O14647 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHD2O14647 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CHD2O14647 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms