Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AL139339.2-201ENST00000608063 657 ntBASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 AC084781.1-201ENST00000613737 656 ntBASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 AL645728.2-202ENST00000641679 227 ntBASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 AC002472.4-201ENST00000641915 272 ntBASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RIMBP3Q9UFD9 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC24.67■■□□□ 1.54
RIMBP3Q9UFD9 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RIMBP3Q9UFD9 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RIMBP3Q9UFD9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RIMBP3Q9UFD9 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
RIMBP3Q9UFD9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC24.67■■□□□ 1.54
RIMBP3Q9UFD9 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RIMBP3Q9UFD9 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC24.67■■□□□ 1.54
RIMBP3Q9UFD9 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC24.67■■□□□ 1.54
RIMBP3Q9UFD9 VDAC1P1-201ENST00000439229 848 ntBASIC24.67■■□□□ 1.54
RIMBP3Q9UFD9 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC24.67■■□□□ 1.54
RIMBP3Q9UFD9 AREG-202ENST00000502307 956 ntTSL 5 BASIC24.67■■□□□ 1.54
RIMBP3Q9UFD9 TP53-221ENST00000615910 1149 ntTSL 5 BASIC24.67■■□□□ 1.54
RIMBP3Q9UFD9 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC24.67■■□□□ 1.54
RIMBP3Q9UFD9 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC24.67■■□□□ 1.54
RIMBP3Q9UFD9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RIMBP3Q9UFD9 AL391256.1-201ENST00000443260 1855 ntBASIC24.67■■□□□ 1.54
RIMBP3Q9UFD9 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
RIMBP3Q9UFD9 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC24.66■■□□□ 1.54
RIMBP3Q9UFD9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RIMBP3Q9UFD9 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RIMBP3Q9UFD9 STK16-203ENST00000409516 895 ntTSL 2 BASIC24.66■■□□□ 1.54
RIMBP3Q9UFD9 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC24.66■■□□□ 1.54
RIMBP3Q9UFD9 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
RIMBP3Q9UFD9 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
RIMBP3Q9UFD9 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC24.66■■□□□ 1.54
RIMBP3Q9UFD9 AC092053.1-201ENST00000605787 1936 ntBASIC24.65■■□□□ 1.54
RIMBP3Q9UFD9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC24.65■■□□□ 1.54
RIMBP3Q9UFD9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC24.65■■□□□ 1.54
RIMBP3Q9UFD9 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
RIMBP3Q9UFD9 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RIMBP3Q9UFD9 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC24.65■■□□□ 1.54
RIMBP3Q9UFD9 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC24.65■■□□□ 1.54
RIMBP3Q9UFD9 THY1-209ENST00000580275 578 ntTSL 3 BASIC24.65■■□□□ 1.54
RIMBP3Q9UFD9 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC24.65■■□□□ 1.54
RIMBP3Q9UFD9 PEBP1P2-201ENST00000603980 558 ntBASIC24.65■■□□□ 1.54
RIMBP3Q9UFD9 AC005041.3-201ENST00000606287 649 ntBASIC24.65■■□□□ 1.54
RIMBP3Q9UFD9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RIMBP3Q9UFD9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC24.65■■□□□ 1.54
RIMBP3Q9UFD9 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RIMBP3Q9UFD9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RIMBP3Q9UFD9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RIMBP3Q9UFD9 POLL-217ENST00000628479 1953 ntTSL 5 BASIC24.65■■□□□ 1.54
RIMBP3Q9UFD9 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
RIMBP3Q9UFD9 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
RIMBP3Q9UFD9 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RIMBP3Q9UFD9 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RIMBP3Q9UFD9 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC24.64■■□□□ 1.54
RIMBP3Q9UFD9 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
RIMBP3Q9UFD9 AL627422.1-201ENST00000434104 580 ntBASIC24.64■■□□□ 1.54
RIMBP3Q9UFD9 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RIMBP3Q9UFD9 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC24.64■■□□□ 1.54
RIMBP3Q9UFD9 POU5F1P2-201ENST00000521750 823 ntBASIC24.64■■□□□ 1.54
RIMBP3Q9UFD9 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC24.64■■□□□ 1.54
RIMBP3Q9UFD9 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC24.64■■□□□ 1.54
RIMBP3Q9UFD9 AC021016.3-201ENST00000608367 477 ntBASIC24.64■■□□□ 1.54
RIMBP3Q9UFD9 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RIMBP3Q9UFD9 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC24.64■■□□□ 1.54
RIMBP3Q9UFD9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
RIMBP3Q9UFD9 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC24.64■■□□□ 1.53
RIMBP3Q9UFD9 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RIMBP3Q9UFD9 HIST2H2BA-201ENST00000412169 381 ntBASIC24.64■■□□□ 1.53
RIMBP3Q9UFD9 GCSHP3-201ENST00000431120 391 ntBASIC24.64■■□□□ 1.53
RIMBP3Q9UFD9 AL645933.1-201ENST00000440087 609 ntBASIC24.64■■□□□ 1.53
RIMBP3Q9UFD9 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC24.64■■□□□ 1.53
RIMBP3Q9UFD9 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC24.64■■□□□ 1.53
RIMBP3Q9UFD9 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
RIMBP3Q9UFD9 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
RIMBP3Q9UFD9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC24.64■■□□□ 1.53
RIMBP3Q9UFD9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RIMBP3Q9UFD9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 BAK1P1-201ENST00000317045 636 ntBASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 HLA-DPA2-205ENST00000433582 733 ntBASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RIMBP3Q9UFD9 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms