Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCDNQ9UBB6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCDNQ9UBB6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NCDNQ9UBB6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCDNQ9UBB6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCDNQ9UBB6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.87■□□□□ 0.13
NCDNQ9UBB6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.87■□□□□ 0.13
NCDNQ9UBB6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 BAATP1-201ENST00000412284 1225 ntBASIC15.87■□□□□ 0.13
NCDNQ9UBB6 AC134915.1-201ENST00000426461 574 ntBASIC15.87■□□□□ 0.13
NCDNQ9UBB6 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 AKR7A2P1-201ENST00000460134 915 ntBASIC15.87■□□□□ 0.13
NCDNQ9UBB6 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 AC023310.1-201ENST00000554836 735 ntBASIC15.87■□□□□ 0.13
NCDNQ9UBB6 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 AL158212.4-201ENST00000624062 1286 ntBASIC15.87■□□□□ 0.13
NCDNQ9UBB6 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCDNQ9UBB6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 AC084018.2-201ENST00000613093 2607 ntBASIC15.86■□□□□ 0.13
NCDNQ9UBB6 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 AC253536.4-201ENST00000440539 267 ntBASIC15.86■□□□□ 0.13
NCDNQ9UBB6 Z93015.1-201ENST00000451718 390 ntBASIC15.86■□□□□ 0.13
NCDNQ9UBB6 FAM86LP-201ENST00000478302 853 ntBASIC15.86■□□□□ 0.13
NCDNQ9UBB6 SCARNA20.5-201ENST00000516991 142 ntBASIC15.86■□□□□ 0.13
NCDNQ9UBB6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 AC008687.7-202ENST00000637404 953 ntBASIC15.86■□□□□ 0.13
NCDNQ9UBB6 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 AL607033.1-201ENST00000623900 1599 ntBASIC15.86■□□□□ 0.13
NCDNQ9UBB6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 315 ms